Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 KRT8P41-201ENST00000533985 1514 ntBASIC21.63■■□□□ 1.05
SHC4Q6S5L8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHC4Q6S5L8 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.63■■□□□ 1.05
SHC4Q6S5L8 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.63■■□□□ 1.05
SHC4Q6S5L8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.63■■□□□ 1.05
SHC4Q6S5L8 AC120498.9-201ENST00000339021 3867 ntBASIC21.63■■□□□ 1.05
SHC4Q6S5L8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
SHC4Q6S5L8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SHC4Q6S5L8 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHC4Q6S5L8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.63■■□□□ 1.05
SHC4Q6S5L8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SHC4Q6S5L8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SHC4Q6S5L8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.63■■□□□ 1.05
SHC4Q6S5L8 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHC4Q6S5L8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SHC4Q6S5L8 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHC4Q6S5L8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHC4Q6S5L8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHC4Q6S5L8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
SHC4Q6S5L8 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHC4Q6S5L8 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHC4Q6S5L8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHC4Q6S5L8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SHC4Q6S5L8 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHC4Q6S5L8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHC4Q6S5L8 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHC4Q6S5L8 ESRRAP1-201ENST00000400596 1257 ntBASIC21.62■■□□□ 1.05
SHC4Q6S5L8 KRASP1-201ENST00000407852 552 ntBASIC21.62■■□□□ 1.05
SHC4Q6S5L8 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.62■■□□□ 1.05
SHC4Q6S5L8 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
SHC4Q6S5L8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHC4Q6S5L8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.62■■□□□ 1.05
SHC4Q6S5L8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.62■■□□□ 1.05
SHC4Q6S5L8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SHC4Q6S5L8 AC009113.1-201ENST00000570267 2443 ntBASIC21.62■■□□□ 1.05
SHC4Q6S5L8 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHC4Q6S5L8 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.62■■□□□ 1.05
SHC4Q6S5L8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHC4Q6S5L8 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SHC4Q6S5L8 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHC4Q6S5L8 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHC4Q6S5L8 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.61■■□□□ 1.05
SHC4Q6S5L8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHC4Q6S5L8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHC4Q6S5L8 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHC4Q6S5L8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHC4Q6S5L8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.61■■□□□ 1.05
SHC4Q6S5L8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.61■■□□□ 1.05
SHC4Q6S5L8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SHC4Q6S5L8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.61■■□□□ 1.05
SHC4Q6S5L8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
SHC4Q6S5L8 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.61■■□□□ 1.05
SHC4Q6S5L8 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SHC4Q6S5L8 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.61■■□□□ 1.05
SHC4Q6S5L8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.61■■□□□ 1.05
SHC4Q6S5L8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.61■■□□□ 1.05
SHC4Q6S5L8 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHC4Q6S5L8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC21.61■■□□□ 1.05
SHC4Q6S5L8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHC4Q6S5L8 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SHC4Q6S5L8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SHC4Q6S5L8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.61■■□□□ 1.05
SHC4Q6S5L8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SHC4Q6S5L8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SHC4Q6S5L8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SHC4Q6S5L8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SHC4Q6S5L8 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SHC4Q6S5L8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SHC4Q6S5L8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SHC4Q6S5L8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SHC4Q6S5L8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SHC4Q6S5L8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SHC4Q6S5L8 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.6■■□□□ 1.05
SHC4Q6S5L8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.6■■□□□ 1.05
SHC4Q6S5L8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.6■■□□□ 1.05
SHC4Q6S5L8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.6■■□□□ 1.05
SHC4Q6S5L8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.6■■□□□ 1.05
SHC4Q6S5L8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
SHC4Q6S5L8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SHC4Q6S5L8 Z98044.1-201ENST00000632503 1764 ntBASIC21.6■■□□□ 1.05
SHC4Q6S5L8 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.6■■□□□ 1.05
SHC4Q6S5L8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.6■■□□□ 1.05
SHC4Q6S5L8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.6■■□□□ 1.05
SHC4Q6S5L8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SHC4Q6S5L8 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SHC4Q6S5L8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.6■■□□□ 1.05
SHC4Q6S5L8 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SHC4Q6S5L8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SHC4Q6S5L8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.59■■□□□ 1.05
SHC4Q6S5L8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
SHC4Q6S5L8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SHC4Q6S5L8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SHC4Q6S5L8 AC239809.2-201ENST00000415381 517 ntBASIC21.59■■□□□ 1.05
SHC4Q6S5L8 TSPY21P-201ENST00000433481 731 ntBASIC21.59■■□□□ 1.05
SHC4Q6S5L8 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SHC4Q6S5L8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.59■■□□□ 1.05
SHC4Q6S5L8 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.59■■□□□ 1.05
SHC4Q6S5L8 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SHC4Q6S5L8 AC124016.1-201ENST00000609552 612 ntBASIC21.59■■□□□ 1.05
SHC4Q6S5L8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms