Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SEC61A1P61619 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SEC61A1P61619 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SEC61A1P61619 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SEC61A1P61619 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SEC61A1P61619 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SEC61A1P61619 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SEC61A1P61619 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SEC61A1P61619 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.74■□□□□ 0.27
SEC61A1P61619 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.74■□□□□ 0.27
SEC61A1P61619 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
SEC61A1P61619 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.74■□□□□ 0.27
SEC61A1P61619 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.74■□□□□ 0.27
SEC61A1P61619 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SEC61A1P61619 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SEC61A1P61619 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SEC61A1P61619 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SEC61A1P61619 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SEC61A1P61619 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
SEC61A1P61619 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.73■□□□□ 0.27
SEC61A1P61619 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.73■□□□□ 0.27
SEC61A1P61619 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SEC61A1P61619 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.73■□□□□ 0.27
SEC61A1P61619 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SEC61A1P61619 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.73■□□□□ 0.27
SEC61A1P61619 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SEC61A1P61619 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SEC61A1P61619 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SEC61A1P61619 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SEC61A1P61619 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SEC61A1P61619 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SEC61A1P61619 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SEC61A1P61619 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.73■□□□□ 0.27
SEC61A1P61619 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SEC61A1P61619 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SEC61A1P61619 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.73■□□□□ 0.27
SEC61A1P61619 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.73■□□□□ 0.27
SEC61A1P61619 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.73■□□□□ 0.27
SEC61A1P61619 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SEC61A1P61619 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SEC61A1P61619 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SEC61A1P61619 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SEC61A1P61619 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SEC61A1P61619 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SEC61A1P61619 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SEC61A1P61619 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SEC61A1P61619 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.73■□□□□ 0.27
SEC61A1P61619 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SEC61A1P61619 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SEC61A1P61619 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SEC61A1P61619 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SEC61A1P61619 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SEC61A1P61619 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SEC61A1P61619 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.72■□□□□ 0.27
SEC61A1P61619 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SEC61A1P61619 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.72■□□□□ 0.27
SEC61A1P61619 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SEC61A1P61619 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SEC61A1P61619 AC018470.1-201ENST00000624790 3129 ntBASIC16.72■□□□□ 0.27
SEC61A1P61619 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SEC61A1P61619 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SEC61A1P61619 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SEC61A1P61619 BCL2-203ENST00000589955 5011 ntBASIC16.72■□□□□ 0.27
SEC61A1P61619 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SEC61A1P61619 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.72■□□□□ 0.27
SEC61A1P61619 AL390719.1-204ENST00000412397 1219 ntBASIC16.72■□□□□ 0.27
SEC61A1P61619 POM121L13P-201ENST00000422362 380 ntBASIC16.72■□□□□ 0.27
SEC61A1P61619 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SEC61A1P61619 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.72■□□□□ 0.27
SEC61A1P61619 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.72■□□□□ 0.27
SEC61A1P61619 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.72■□□□□ 0.27
SEC61A1P61619 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.72■□□□□ 0.27
SEC61A1P61619 AL390961.4-201ENST00000623958 2535 ntBASIC16.72■□□□□ 0.27
SEC61A1P61619 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SEC61A1P61619 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SEC61A1P61619 LINC01465-201ENST00000408887 1940 ntBASIC16.72■□□□□ 0.27
SEC61A1P61619 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SEC61A1P61619 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.72■□□□□ 0.27
SEC61A1P61619 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SEC61A1P61619 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.71■□□□□ 0.27
SEC61A1P61619 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SEC61A1P61619 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SEC61A1P61619 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.71■□□□□ 0.27
SEC61A1P61619 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SEC61A1P61619 AP000997.3-201ENST00000623333 2250 ntBASIC16.71■□□□□ 0.27
SEC61A1P61619 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SEC61A1P61619 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SEC61A1P61619 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.71■□□□□ 0.27
SEC61A1P61619 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SEC61A1P61619 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.71■□□□□ 0.27
SEC61A1P61619 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.71■□□□□ 0.27
SEC61A1P61619 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SEC61A1P61619 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SEC61A1P61619 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.71■□□□□ 0.27
SEC61A1P61619 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SEC61A1P61619 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SEC61A1P61619 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SEC61A1P61619 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.71■□□□□ 0.27
SEC61A1P61619 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SEC61A1P61619 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms