Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MIR4497-201ENST00000583208 89 ntBASIC17.56■□□□□ 0.4
CLDN20P56880 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN20P56880 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
CLDN20P56880 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CLDN20P56880 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN20P56880 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CLDN20P56880 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.56■□□□□ 0.4
CLDN20P56880 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN20P56880 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.55■□□□□ 0.4
CLDN20P56880 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN20P56880 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN20P56880 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN20P56880 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN20P56880 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN20P56880 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CLDN20P56880 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CLDN20P56880 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN20P56880 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN20P56880 FAM197Y1-201ENST00000421178 764 ntBASIC17.55■□□□□ 0.4
CLDN20P56880 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.55■□□□□ 0.4
CLDN20P56880 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN20P56880 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.55■□□□□ 0.4
CLDN20P56880 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN20P56880 AC073195.1-201ENST00000607241 877 ntBASIC17.55■□□□□ 0.4
CLDN20P56880 AL353708.3-201ENST00000610272 989 ntBASIC17.55■□□□□ 0.4
CLDN20P56880 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN20P56880 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.55■□□□□ 0.4
CLDN20P56880 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CLDN20P56880 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
CLDN20P56880 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN20P56880 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN20P56880 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CLDN20P56880 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN20P56880 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CLDN20P56880 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN20P56880 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN20P56880 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN20P56880 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN20P56880 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN20P56880 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN20P56880 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN20P56880 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN20P56880 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN20P56880 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN20P56880 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN20P56880 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN20P56880 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN20P56880 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CLDN20P56880 NIFKP9-201ENST00000419265 221 ntBASIC17.54■□□□□ 0.4
CLDN20P56880 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.54■□□□□ 0.4
CLDN20P56880 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN20P56880 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN20P56880 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.54■□□□□ 0.4
CLDN20P56880 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.54■□□□□ 0.4
CLDN20P56880 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CLDN20P56880 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.54■□□□□ 0.4
CLDN20P56880 CD177P1-201ENST00000606252 935 ntBASIC17.54■□□□□ 0.4
CLDN20P56880 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
CLDN20P56880 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.54■□□□□ 0.4
CLDN20P56880 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN20P56880 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN20P56880 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN20P56880 KRT8P8-201ENST00000434750 1448 ntBASIC17.54■□□□□ 0.4
CLDN20P56880 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.54■□□□□ 0.4
CLDN20P56880 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CLDN20P56880 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.54■□□□□ 0.4
CLDN20P56880 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN20P56880 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN20P56880 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN20P56880 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.53■□□□□ 0.4
CLDN20P56880 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN20P56880 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN20P56880 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN20P56880 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN20P56880 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN20P56880 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN20P56880 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN20P56880 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.53■□□□□ 0.4
CLDN20P56880 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN20P56880 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN20P56880 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN20P56880 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.53■□□□□ 0.4
CLDN20P56880 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN20P56880 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN20P56880 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN20P56880 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CLDN20P56880 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.53■□□□□ 0.4
CLDN20P56880 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CLDN20P56880 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN20P56880 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN20P56880 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN20P56880 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.53■□□□□ 0.4
CLDN20P56880 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.53■□□□□ 0.4
CLDN20P56880 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.53■□□□□ 0.4
CLDN20P56880 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.53■□□□□ 0.4
CLDN20P56880 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN20P56880 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN20P56880 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN20P56880 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN20P56880 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms