Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDR1P51861 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDR1P51861 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDR1P51861 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CDR1P51861 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDR1P51861 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDR1P51861 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDR1P51861 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDR1P51861 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.91■□□□□ 0.94
CDR1P51861 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDR1P51861 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDR1P51861 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDR1P51861 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDR1P51861 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.91■□□□□ 0.94
CDR1P51861 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.91■□□□□ 0.94
CDR1P51861 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDR1P51861 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.91■□□□□ 0.94
CDR1P51861 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDR1P51861 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.91■□□□□ 0.94
CDR1P51861 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CDR1P51861 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CDR1P51861 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDR1P51861 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.9■□□□□ 0.94
CDR1P51861 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CDR1P51861 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDR1P51861 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDR1P51861 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDR1P51861 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDR1P51861 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CDR1P51861 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDR1P51861 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDR1P51861 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CDR1P51861 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDR1P51861 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDR1P51861 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.9■□□□□ 0.94
CDR1P51861 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDR1P51861 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDR1P51861 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDR1P51861 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDR1P51861 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDR1P51861 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDR1P51861 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CDR1P51861 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDR1P51861 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDR1P51861 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDR1P51861 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.9■□□□□ 0.94
CDR1P51861 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDR1P51861 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDR1P51861 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDR1P51861 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CDR1P51861 AC116562.4-201ENST00000641316 2276 ntBASIC20.89■□□□□ 0.94
CDR1P51861 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.89■□□□□ 0.94
CDR1P51861 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDR1P51861 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDR1P51861 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.89■□□□□ 0.93
CDR1P51861 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDR1P51861 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.89■□□□□ 0.93
CDR1P51861 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDR1P51861 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CDR1P51861 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.89■□□□□ 0.93
CDR1P51861 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CDR1P51861 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CDR1P51861 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.89■□□□□ 0.93
CDR1P51861 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDR1P51861 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.89■□□□□ 0.93
CDR1P51861 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.89■□□□□ 0.93
CDR1P51861 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CDR1P51861 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.89■□□□□ 0.93
CDR1P51861 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDR1P51861 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.89■□□□□ 0.93
CDR1P51861 AC004264.1-201ENST00000608354 794 ntBASIC20.89■□□□□ 0.93
CDR1P51861 CR392000.1-201ENST00000624770 1228 ntBASIC20.89■□□□□ 0.93
CDR1P51861 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDR1P51861 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDR1P51861 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDR1P51861 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDR1P51861 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
CDR1P51861 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDR1P51861 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDR1P51861 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDR1P51861 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDR1P51861 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDR1P51861 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDR1P51861 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDR1P51861 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDR1P51861 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDR1P51861 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDR1P51861 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.88■□□□□ 0.93
CDR1P51861 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC20.88■□□□□ 0.93
CDR1P51861 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDR1P51861 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.88■□□□□ 0.93
CDR1P51861 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.88■□□□□ 0.93
CDR1P51861 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDR1P51861 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CDR1P51861 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDR1P51861 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDR1P51861 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.88■□□□□ 0.93
CDR1P51861 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.88■□□□□ 0.93
CDR1P51861 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDR1P51861 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms