Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF40O75150 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF40O75150 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF40O75150 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
RNF40O75150 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RNF40O75150 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF40O75150 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF40O75150 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF40O75150 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RNF40O75150 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF40O75150 PRKY-204ENST00000533551 1019 ntBASIC20.62■□□□□ 0.89
RNF40O75150 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.62■□□□□ 0.89
RNF40O75150 RARRES2P10-201ENST00000564312 460 ntBASIC20.62■□□□□ 0.89
RNF40O75150 AC010331.1-201ENST00000611423 582 ntBASIC20.62■□□□□ 0.89
RNF40O75150 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.62■□□□□ 0.89
RNF40O75150 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF40O75150 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RNF40O75150 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RNF40O75150 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF40O75150 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF40O75150 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF40O75150 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF40O75150 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF40O75150 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
RNF40O75150 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF40O75150 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF40O75150 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF40O75150 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF40O75150 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF40O75150 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF40O75150 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF40O75150 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RNF40O75150 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF40O75150 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF40O75150 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF40O75150 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF40O75150 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF40O75150 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF40O75150 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF40O75150 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF40O75150 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.61■□□□□ 0.89
RNF40O75150 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF40O75150 AC133561.5-201ENST00000635547 218 ntBASIC20.61■□□□□ 0.89
RNF40O75150 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF40O75150 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF40O75150 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF40O75150 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RNF40O75150 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF40O75150 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF40O75150 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF40O75150 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RNF40O75150 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF40O75150 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RNF40O75150 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF40O75150 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF40O75150 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF40O75150 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RNF40O75150 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
RNF40O75150 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF40O75150 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF40O75150 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF40O75150 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF40O75150 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF40O75150 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RNF40O75150 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF40O75150 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF40O75150 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.6■□□□□ 0.89
RNF40O75150 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF40O75150 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF40O75150 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF40O75150 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.6■□□□□ 0.89
RNF40O75150 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.6■□□□□ 0.89
RNF40O75150 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.6■□□□□ 0.89
RNF40O75150 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF40O75150 LINC01465-201ENST00000408887 1940 ntBASIC20.6■□□□□ 0.89
RNF40O75150 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RNF40O75150 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF40O75150 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF40O75150 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF40O75150 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RNF40O75150 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RNF40O75150 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF40O75150 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF40O75150 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
RNF40O75150 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF40O75150 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF40O75150 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF40O75150 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF40O75150 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF40O75150 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF40O75150 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.59■□□□□ 0.89
RNF40O75150 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF40O75150 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF40O75150 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF40O75150 AC087499.1-201ENST00000418141 1075 ntBASIC20.59■□□□□ 0.89
RNF40O75150 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF40O75150 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF40O75150 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF40O75150 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF40O75150 AC079416.2-201ENST00000625035 1193 ntBASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms