Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.17■□□□□ 0.34
PFDN1O60925 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PFDN1O60925 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.17■□□□□ 0.34
PFDN1O60925 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PFDN1O60925 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PFDN1O60925 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PFDN1O60925 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.17■□□□□ 0.34
PFDN1O60925 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PFDN1O60925 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PFDN1O60925 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PFDN1O60925 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.17■□□□□ 0.34
PFDN1O60925 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PFDN1O60925 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PFDN1O60925 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.17■□□□□ 0.34
PFDN1O60925 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PFDN1O60925 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.17■□□□□ 0.34
PFDN1O60925 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PFDN1O60925 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC17.17■□□□□ 0.34
PFDN1O60925 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PFDN1O60925 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PFDN1O60925 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PFDN1O60925 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PFDN1O60925 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PFDN1O60925 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
PFDN1O60925 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PFDN1O60925 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PFDN1O60925 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.17■□□□□ 0.34
PFDN1O60925 AC011484.1-201ENST00000377652 1995 ntBASIC17.17■□□□□ 0.34
PFDN1O60925 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.17■□□□□ 0.34
PFDN1O60925 UBALD1-205ENST00000590891 2641 ntBASIC17.17■□□□□ 0.34
PFDN1O60925 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.16■□□□□ 0.34
PFDN1O60925 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PFDN1O60925 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PFDN1O60925 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.16■□□□□ 0.34
PFDN1O60925 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.16■□□□□ 0.34
PFDN1O60925 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PFDN1O60925 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PFDN1O60925 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PFDN1O60925 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PFDN1O60925 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PFDN1O60925 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
PFDN1O60925 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PFDN1O60925 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PFDN1O60925 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PFDN1O60925 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.16■□□□□ 0.34
PFDN1O60925 AC087393.1-201ENST00000582896 145 ntBASIC17.16■□□□□ 0.34
PFDN1O60925 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PFDN1O60925 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PFDN1O60925 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PFDN1O60925 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.16■□□□□ 0.34
PFDN1O60925 AC022211.2-201ENST00000585075 2527 ntBASIC17.16■□□□□ 0.34
PFDN1O60925 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PFDN1O60925 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PFDN1O60925 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PFDN1O60925 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PFDN1O60925 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PFDN1O60925 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PFDN1O60925 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PFDN1O60925 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.16■□□□□ 0.34
PFDN1O60925 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PFDN1O60925 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
PFDN1O60925 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PFDN1O60925 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PFDN1O60925 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.15■□□□□ 0.34
PFDN1O60925 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PFDN1O60925 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.15■□□□□ 0.34
PFDN1O60925 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.15■□□□□ 0.34
PFDN1O60925 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PFDN1O60925 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PFDN1O60925 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
PFDN1O60925 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.15■□□□□ 0.34
PFDN1O60925 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
PFDN1O60925 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PFDN1O60925 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC17.15■□□□□ 0.34
PFDN1O60925 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PFDN1O60925 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PFDN1O60925 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.15■□□□□ 0.34
PFDN1O60925 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.15■□□□□ 0.34
PFDN1O60925 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
PFDN1O60925 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PFDN1O60925 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PFDN1O60925 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.15■□□□□ 0.34
PFDN1O60925 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.15■□□□□ 0.34
PFDN1O60925 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.15■□□□□ 0.34
PFDN1O60925 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.15■□□□□ 0.34
PFDN1O60925 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PFDN1O60925 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PFDN1O60925 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
PFDN1O60925 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
PFDN1O60925 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PFDN1O60925 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PFDN1O60925 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PFDN1O60925 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PFDN1O60925 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PFDN1O60925 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PFDN1O60925 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PFDN1O60925 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PFDN1O60925 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.14■□□□□ 0.33
PFDN1O60925 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PFDN1O60925 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms