Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRABD2BA6NFA1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
TRABD2BA6NFA1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.41■□□□□ 0.54
TRABD2BA6NFA1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRABD2BA6NFA1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRABD2BA6NFA1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.41■□□□□ 0.54
TRABD2BA6NFA1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRABD2BA6NFA1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
TRABD2BA6NFA1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TRABD2BA6NFA1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRABD2BA6NFA1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.4■□□□□ 0.54
TRABD2BA6NFA1 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.4■□□□□ 0.54
TRABD2BA6NFA1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
TRABD2BA6NFA1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
TRABD2BA6NFA1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.4■□□□□ 0.54
TRABD2BA6NFA1 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.4■□□□□ 0.54
TRABD2BA6NFA1 AC092329.2-201ENST00000598402 547 ntBASIC18.4■□□□□ 0.54
TRABD2BA6NFA1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TRABD2BA6NFA1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRABD2BA6NFA1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
TRABD2BA6NFA1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.4■□□□□ 0.54
TRABD2BA6NFA1 DPP3P2-201ENST00000416030 1696 ntBASIC18.4■□□□□ 0.54
TRABD2BA6NFA1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRABD2BA6NFA1 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRABD2BA6NFA1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRABD2BA6NFA1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRABD2BA6NFA1 KRT8P10-201ENST00000450021 1447 ntBASIC18.4■□□□□ 0.54
TRABD2BA6NFA1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRABD2BA6NFA1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
TRABD2BA6NFA1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRABD2BA6NFA1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRABD2BA6NFA1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
TRABD2BA6NFA1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.39■□□□□ 0.54
TRABD2BA6NFA1 PLK5-205ENST00000642079 1969 ntBASIC18.39■□□□□ 0.53
TRABD2BA6NFA1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.39■□□□□ 0.53
TRABD2BA6NFA1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRABD2BA6NFA1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRABD2BA6NFA1 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
TRABD2BA6NFA1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.39■□□□□ 0.53
TRABD2BA6NFA1 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRABD2BA6NFA1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRABD2BA6NFA1 AC111152.3-201ENST00000569699 673 ntBASIC18.39■□□□□ 0.53
TRABD2BA6NFA1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TRABD2BA6NFA1 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.39■□□□□ 0.53
TRABD2BA6NFA1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TRABD2BA6NFA1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRABD2BA6NFA1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TRABD2BA6NFA1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.39■□□□□ 0.53
TRABD2BA6NFA1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.39■□□□□ 0.53
TRABD2BA6NFA1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.39■□□□□ 0.53
TRABD2BA6NFA1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRABD2BA6NFA1 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRABD2BA6NFA1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TRABD2BA6NFA1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRABD2BA6NFA1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRABD2BA6NFA1 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.38■□□□□ 0.53
TRABD2BA6NFA1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRABD2BA6NFA1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRABD2BA6NFA1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRABD2BA6NFA1 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRABD2BA6NFA1 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRABD2BA6NFA1 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRABD2BA6NFA1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.38■□□□□ 0.53
TRABD2BA6NFA1 KRT17P6-201ENST00000453795 1220 ntBASIC18.38■□□□□ 0.53
TRABD2BA6NFA1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.38■□□□□ 0.53
TRABD2BA6NFA1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.38■□□□□ 0.53
TRABD2BA6NFA1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.38■□□□□ 0.53
TRABD2BA6NFA1 GCSHP2-201ENST00000560971 527 ntBASIC18.38■□□□□ 0.53
TRABD2BA6NFA1 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRABD2BA6NFA1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRABD2BA6NFA1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.38■□□□□ 0.53
TRABD2BA6NFA1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TRABD2BA6NFA1 PHGDH-210ENST00000641115 1638 ntBASIC18.38■□□□□ 0.53
TRABD2BA6NFA1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TRABD2BA6NFA1 AC006128.1-201ENST00000624704 1661 ntBASIC18.38■□□□□ 0.53
TRABD2BA6NFA1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRABD2BA6NFA1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRABD2BA6NFA1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.37■□□□□ 0.53
TRABD2BA6NFA1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRABD2BA6NFA1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.37■□□□□ 0.53
TRABD2BA6NFA1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRABD2BA6NFA1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TRABD2BA6NFA1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRABD2BA6NFA1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRABD2BA6NFA1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRABD2BA6NFA1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRABD2BA6NFA1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.37■□□□□ 0.53
TRABD2BA6NFA1 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.37■□□□□ 0.53
TRABD2BA6NFA1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRABD2BA6NFA1 AC006538.3-201ENST00000612495 578 ntBASIC18.37■□□□□ 0.53
TRABD2BA6NFA1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.37■□□□□ 0.53
TRABD2BA6NFA1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRABD2BA6NFA1 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.37■□□□□ 0.53
TRABD2BA6NFA1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRABD2BA6NFA1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRABD2BA6NFA1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.37■□□□□ 0.53
TRABD2BA6NFA1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TRABD2BA6NFA1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRABD2BA6NFA1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRABD2BA6NFA1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms