Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GPC6Q9Y625 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.12■□□□□ 0.49
GPC6Q9Y625 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GPC6Q9Y625 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GPC6Q9Y625 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
GPC6Q9Y625 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GPC6Q9Y625 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
GPC6Q9Y625 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
GPC6Q9Y625 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GPC6Q9Y625 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.12■□□□□ 0.49
GPC6Q9Y625 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GPC6Q9Y625 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
GPC6Q9Y625 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GPC6Q9Y625 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GPC6Q9Y625 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GPC6Q9Y625 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.11■□□□□ 0.49
GPC6Q9Y625 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GPC6Q9Y625 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
GPC6Q9Y625 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GPC6Q9Y625 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
GPC6Q9Y625 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
GPC6Q9Y625 KRT18P6-201ENST00000555540 1265 ntBASIC18.11■□□□□ 0.49
GPC6Q9Y625 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.11■□□□□ 0.49
GPC6Q9Y625 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GPC6Q9Y625 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.11■□□□□ 0.49
GPC6Q9Y625 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.11■□□□□ 0.49
GPC6Q9Y625 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
GPC6Q9Y625 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
GPC6Q9Y625 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.11■□□□□ 0.49
GPC6Q9Y625 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
GPC6Q9Y625 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GPC6Q9Y625 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.11■□□□□ 0.49
GPC6Q9Y625 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GPC6Q9Y625 AL133373.2-201ENST00000623187 2828 ntBASIC18.11■□□□□ 0.49
GPC6Q9Y625 AC106820.2-201ENST00000563775 3264 ntBASIC18.11■□□□□ 0.49
GPC6Q9Y625 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GPC6Q9Y625 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GPC6Q9Y625 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GPC6Q9Y625 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.1■□□□□ 0.49
GPC6Q9Y625 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GPC6Q9Y625 AP000997.3-201ENST00000623333 2250 ntBASIC18.1■□□□□ 0.49
GPC6Q9Y625 LINC01465-201ENST00000408887 1940 ntBASIC18.1■□□□□ 0.49
GPC6Q9Y625 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
GPC6Q9Y625 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.1■□□□□ 0.49
GPC6Q9Y625 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GPC6Q9Y625 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GPC6Q9Y625 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
GPC6Q9Y625 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.1■□□□□ 0.49
GPC6Q9Y625 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.1■□□□□ 0.49
GPC6Q9Y625 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.1■□□□□ 0.49
GPC6Q9Y625 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
GPC6Q9Y625 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.1■□□□□ 0.49
GPC6Q9Y625 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.1■□□□□ 0.49
GPC6Q9Y625 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.1■□□□□ 0.49
GPC6Q9Y625 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.1■□□□□ 0.49
GPC6Q9Y625 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
GPC6Q9Y625 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.1■□□□□ 0.49
GPC6Q9Y625 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GPC6Q9Y625 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.1■□□□□ 0.49
GPC6Q9Y625 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.1■□□□□ 0.49
GPC6Q9Y625 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
GPC6Q9Y625 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GPC6Q9Y625 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GPC6Q9Y625 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.1■□□□□ 0.49
GPC6Q9Y625 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.09■□□□□ 0.49
GPC6Q9Y625 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.09■□□□□ 0.49
GPC6Q9Y625 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
GPC6Q9Y625 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.09■□□□□ 0.49
GPC6Q9Y625 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GPC6Q9Y625 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.09■□□□□ 0.49
GPC6Q9Y625 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC6Q9Y625 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC6Q9Y625 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
GPC6Q9Y625 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.09■□□□□ 0.49
GPC6Q9Y625 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC6Q9Y625 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC6Q9Y625 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
GPC6Q9Y625 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GPC6Q9Y625 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GPC6Q9Y625 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GPC6Q9Y625 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.09■□□□□ 0.49
GPC6Q9Y625 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC6Q9Y625 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC6Q9Y625 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.09■□□□□ 0.49
GPC6Q9Y625 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.09■□□□□ 0.49
GPC6Q9Y625 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.09■□□□□ 0.49
GPC6Q9Y625 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.09■□□□□ 0.49
GPC6Q9Y625 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.09■□□□□ 0.49
GPC6Q9Y625 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.09■□□□□ 0.49
GPC6Q9Y625 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.09■□□□□ 0.49
GPC6Q9Y625 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC6Q9Y625 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
GPC6Q9Y625 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC6Q9Y625 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GPC6Q9Y625 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GPC6Q9Y625 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.08■□□□□ 0.49
GPC6Q9Y625 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
GPC6Q9Y625 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
GPC6Q9Y625 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
GPC6Q9Y625 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms