Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAPPC1Q9Y5R8 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
TRAPPC1Q9Y5R8 ASL-203ENST00000380839 1765 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAPPC1Q9Y5R8 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAPPC1Q9Y5R8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRAPPC1Q9Y5R8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TRAPPC1Q9Y5R8 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRAPPC1Q9Y5R8 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
TRAPPC1Q9Y5R8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAPPC1Q9Y5R8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAPPC1Q9Y5R8 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TRAPPC1Q9Y5R8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAPPC1Q9Y5R8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TRAPPC1Q9Y5R8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAPPC1Q9Y5R8 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAPPC1Q9Y5R8 AC009237.3-201ENST00000393279 1427 ntBASIC14.56□□□□□ -0.08
TRAPPC1Q9Y5R8 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRAPPC1Q9Y5R8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAPPC1Q9Y5R8 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAPPC1Q9Y5R8 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAPPC1Q9Y5R8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAPPC1Q9Y5R8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAPPC1Q9Y5R8 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAPPC1Q9Y5R8 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 AP005435.1-201ENST00000529293 1178 ntBASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 MIR3181-201ENST00000578512 73 ntBASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 AC116050.2-201ENST00000612102 1779 ntBASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAPPC1Q9Y5R8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 MIR4508-201ENST00000584178 70 ntBASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 AC010980.1-201ENST00000587192 1142 ntBASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 MTDHP2-201ENST00000601468 714 ntBASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms