Protein–RNA interactions for Protein: Q9UKG1

APPL1, DCC-interacting protein 13-alpha, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPL1Q9UKG1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APPL1Q9UKG1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APPL1Q9UKG1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APPL1Q9UKG1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APPL1Q9UKG1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
APPL1Q9UKG1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APPL1Q9UKG1 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APPL1Q9UKG1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
APPL1Q9UKG1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
APPL1Q9UKG1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
APPL1Q9UKG1 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.42■□□□□ 0.7
APPL1Q9UKG1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.42■□□□□ 0.7
APPL1Q9UKG1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
APPL1Q9UKG1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.42■□□□□ 0.7
APPL1Q9UKG1 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.42■□□□□ 0.7
APPL1Q9UKG1 BX088651.1-201ENST00000540551 451 ntBASIC19.42■□□□□ 0.7
APPL1Q9UKG1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
APPL1Q9UKG1 AC113410.3-201ENST00000623366 203 ntBASIC19.42■□□□□ 0.7
APPL1Q9UKG1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.42■□□□□ 0.7
APPL1Q9UKG1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
APPL1Q9UKG1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APPL1Q9UKG1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.42■□□□□ 0.7
APPL1Q9UKG1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APPL1Q9UKG1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APPL1Q9UKG1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
APPL1Q9UKG1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
APPL1Q9UKG1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APPL1Q9UKG1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
APPL1Q9UKG1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.42■□□□□ 0.7
APPL1Q9UKG1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
APPL1Q9UKG1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
APPL1Q9UKG1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APPL1Q9UKG1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.41■□□□□ 0.7
APPL1Q9UKG1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.41■□□□□ 0.7
APPL1Q9UKG1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.41■□□□□ 0.7
APPL1Q9UKG1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APPL1Q9UKG1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
APPL1Q9UKG1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APPL1Q9UKG1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
APPL1Q9UKG1 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APPL1Q9UKG1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APPL1Q9UKG1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.41■□□□□ 0.7
APPL1Q9UKG1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.41■□□□□ 0.7
APPL1Q9UKG1 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.41■□□□□ 0.7
APPL1Q9UKG1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
APPL1Q9UKG1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
APPL1Q9UKG1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APPL1Q9UKG1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
APPL1Q9UKG1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
APPL1Q9UKG1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
APPL1Q9UKG1 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
APPL1Q9UKG1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.41■□□□□ 0.7
APPL1Q9UKG1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
APPL1Q9UKG1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APPL1Q9UKG1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APPL1Q9UKG1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
APPL1Q9UKG1 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
APPL1Q9UKG1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.4■□□□□ 0.7
APPL1Q9UKG1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APPL1Q9UKG1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APPL1Q9UKG1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
APPL1Q9UKG1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
APPL1Q9UKG1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
APPL1Q9UKG1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APPL1Q9UKG1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
APPL1Q9UKG1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APPL1Q9UKG1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
APPL1Q9UKG1 AC211429.1-201ENST00000415277 523 ntBASIC19.4■□□□□ 0.7
APPL1Q9UKG1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
APPL1Q9UKG1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.4■□□□□ 0.7
APPL1Q9UKG1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.4■□□□□ 0.7
APPL1Q9UKG1 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.4■□□□□ 0.7
APPL1Q9UKG1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
APPL1Q9UKG1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.4■□□□□ 0.7
APPL1Q9UKG1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.4■□□□□ 0.7
APPL1Q9UKG1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
APPL1Q9UKG1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
APPL1Q9UKG1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APPL1Q9UKG1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APPL1Q9UKG1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
APPL1Q9UKG1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.4■□□□□ 0.7
APPL1Q9UKG1 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APPL1Q9UKG1 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
APPL1Q9UKG1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
APPL1Q9UKG1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
APPL1Q9UKG1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
APPL1Q9UKG1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
APPL1Q9UKG1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
APPL1Q9UKG1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.39■□□□□ 0.69
APPL1Q9UKG1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
APPL1Q9UKG1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APPL1Q9UKG1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
APPL1Q9UKG1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
APPL1Q9UKG1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
APPL1Q9UKG1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APPL1Q9UKG1 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
APPL1Q9UKG1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
APPL1Q9UKG1 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
APPL1Q9UKG1 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APPL1Q9UKG1 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms