Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.98■□□□□ 0.79
PPARGC1AQ9UBK2 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.98■□□□□ 0.79
PPARGC1AQ9UBK2 AC113410.3-201ENST00000623366 203 ntBASIC19.98■□□□□ 0.79
PPARGC1AQ9UBK2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PPARGC1AQ9UBK2 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PPARGC1AQ9UBK2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.98■□□□□ 0.79
PPARGC1AQ9UBK2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.98■□□□□ 0.79
PPARGC1AQ9UBK2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
PPARGC1AQ9UBK2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
PPARGC1AQ9UBK2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PPARGC1AQ9UBK2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PPARGC1AQ9UBK2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PPARGC1AQ9UBK2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PPARGC1AQ9UBK2 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PPARGC1AQ9UBK2 ZNF815P-204ENST00000434898 1737 ntBASIC19.97■□□□□ 0.79
PPARGC1AQ9UBK2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PPARGC1AQ9UBK2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PPARGC1AQ9UBK2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PPARGC1AQ9UBK2 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PPARGC1AQ9UBK2 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.97■□□□□ 0.79
PPARGC1AQ9UBK2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PPARGC1AQ9UBK2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
PPARGC1AQ9UBK2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.97■□□□□ 0.79
PPARGC1AQ9UBK2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PPARGC1AQ9UBK2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PPARGC1AQ9UBK2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.97■□□□□ 0.79
PPARGC1AQ9UBK2 AP000974.1-201ENST00000623909 2387 ntBASIC19.97■□□□□ 0.79
PPARGC1AQ9UBK2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PPARGC1AQ9UBK2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.96■□□□□ 0.79
PPARGC1AQ9UBK2 KRT16P1-201ENST00000399124 1418 ntBASIC19.96■□□□□ 0.79
PPARGC1AQ9UBK2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.96■□□□□ 0.79
PPARGC1AQ9UBK2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PPARGC1AQ9UBK2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PPARGC1AQ9UBK2 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PPARGC1AQ9UBK2 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PPARGC1AQ9UBK2 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.96■□□□□ 0.79
PPARGC1AQ9UBK2 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PPARGC1AQ9UBK2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PPARGC1AQ9UBK2 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.96■□□□□ 0.79
PPARGC1AQ9UBK2 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.96■□□□□ 0.79
PPARGC1AQ9UBK2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.96■□□□□ 0.79
PPARGC1AQ9UBK2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PPARGC1AQ9UBK2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PPARGC1AQ9UBK2 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PPARGC1AQ9UBK2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PPARGC1AQ9UBK2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PPARGC1AQ9UBK2 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.95■□□□□ 0.78
PPARGC1AQ9UBK2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PPARGC1AQ9UBK2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PPARGC1AQ9UBK2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.95■□□□□ 0.78
PPARGC1AQ9UBK2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PPARGC1AQ9UBK2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
PPARGC1AQ9UBK2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.95■□□□□ 0.78
PPARGC1AQ9UBK2 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PPARGC1AQ9UBK2 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
PPARGC1AQ9UBK2 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PPARGC1AQ9UBK2 AC004980.1-204ENST00000429707 299 ntBASIC19.95■□□□□ 0.78
PPARGC1AQ9UBK2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.95■□□□□ 0.78
PPARGC1AQ9UBK2 AC093827.2-201ENST00000512654 315 ntBASIC19.95■□□□□ 0.78
PPARGC1AQ9UBK2 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PPARGC1AQ9UBK2 CD177P1-201ENST00000606252 935 ntBASIC19.95■□□□□ 0.78
PPARGC1AQ9UBK2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.95■□□□□ 0.78
PPARGC1AQ9UBK2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
PPARGC1AQ9UBK2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PPARGC1AQ9UBK2 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PPARGC1AQ9UBK2 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.95■□□□□ 0.78
PPARGC1AQ9UBK2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.95■□□□□ 0.78
PPARGC1AQ9UBK2 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PPARGC1AQ9UBK2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PPARGC1AQ9UBK2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.94■□□□□ 0.78
PPARGC1AQ9UBK2 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PPARGC1AQ9UBK2 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PPARGC1AQ9UBK2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PPARGC1AQ9UBK2 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PPARGC1AQ9UBK2 AC104417.2-201ENST00000562989 1793 ntBASIC19.94■□□□□ 0.78
PPARGC1AQ9UBK2 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PPARGC1AQ9UBK2 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PPARGC1AQ9UBK2 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.94■□□□□ 0.78
PPARGC1AQ9UBK2 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.94■□□□□ 0.78
PPARGC1AQ9UBK2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.94■□□□□ 0.78
PPARGC1AQ9UBK2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.94■□□□□ 0.78
PPARGC1AQ9UBK2 AL160286.2-201ENST00000567150 934 ntBASIC19.94■□□□□ 0.78
PPARGC1AQ9UBK2 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PPARGC1AQ9UBK2 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.94■□□□□ 0.78
PPARGC1AQ9UBK2 AC131212.4-201ENST00000623606 975 ntBASIC19.94■□□□□ 0.78
PPARGC1AQ9UBK2 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.94■□□□□ 0.78
PPARGC1AQ9UBK2 CR392000.1-201ENST00000624770 1228 ntBASIC19.94■□□□□ 0.78
PPARGC1AQ9UBK2 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PPARGC1AQ9UBK2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PPARGC1AQ9UBK2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.94■□□□□ 0.78
PPARGC1AQ9UBK2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PPARGC1AQ9UBK2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PPARGC1AQ9UBK2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PPARGC1AQ9UBK2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PPARGC1AQ9UBK2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PPARGC1AQ9UBK2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PPARGC1AQ9UBK2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
PPARGC1AQ9UBK2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PPARGC1AQ9UBK2 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PPARGC1AQ9UBK2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms