Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PARPBPQ9NWS1 AC093827.2-201ENST00000512654 315 ntBASIC17.17■□□□□ 0.34
PARPBPQ9NWS1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.17■□□□□ 0.34
PARPBPQ9NWS1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.17■□□□□ 0.34
PARPBPQ9NWS1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PARPBPQ9NWS1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.17■□□□□ 0.34
PARPBPQ9NWS1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.17■□□□□ 0.34
PARPBPQ9NWS1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PARPBPQ9NWS1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.17■□□□□ 0.34
PARPBPQ9NWS1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PARPBPQ9NWS1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PARPBPQ9NWS1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PARPBPQ9NWS1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PARPBPQ9NWS1 KRT17P2-201ENST00000300992 1314 ntBASIC17.17■□□□□ 0.34
PARPBPQ9NWS1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PARPBPQ9NWS1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.17■□□□□ 0.34
PARPBPQ9NWS1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PARPBPQ9NWS1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.17■□□□□ 0.34
PARPBPQ9NWS1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PARPBPQ9NWS1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PARPBPQ9NWS1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PARPBPQ9NWS1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.16■□□□□ 0.34
PARPBPQ9NWS1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.16■□□□□ 0.34
PARPBPQ9NWS1 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PARPBPQ9NWS1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PARPBPQ9NWS1 ZNF815P-204ENST00000434898 1737 ntBASIC17.16■□□□□ 0.34
PARPBPQ9NWS1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PARPBPQ9NWS1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PARPBPQ9NWS1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
PARPBPQ9NWS1 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PARPBPQ9NWS1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.16■□□□□ 0.34
PARPBPQ9NWS1 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.16■□□□□ 0.34
PARPBPQ9NWS1 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.16■□□□□ 0.34
PARPBPQ9NWS1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PARPBPQ9NWS1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.16■□□□□ 0.34
PARPBPQ9NWS1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.16■□□□□ 0.34
PARPBPQ9NWS1 AC026271.3-201ENST00000571884 352 ntBASIC17.16■□□□□ 0.34
PARPBPQ9NWS1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.16■□□□□ 0.34
PARPBPQ9NWS1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PARPBPQ9NWS1 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
PARPBPQ9NWS1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.16■□□□□ 0.34
PARPBPQ9NWS1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.16■□□□□ 0.34
PARPBPQ9NWS1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.16■□□□□ 0.34
PARPBPQ9NWS1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PARPBPQ9NWS1 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PARPBPQ9NWS1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PARPBPQ9NWS1 AC125437.2-201ENST00000625180 2167 ntBASIC17.15■□□□□ 0.34
PARPBPQ9NWS1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.15■□□□□ 0.34
PARPBPQ9NWS1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PARPBPQ9NWS1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PARPBPQ9NWS1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PARPBPQ9NWS1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PARPBPQ9NWS1 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
PARPBPQ9NWS1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PARPBPQ9NWS1 FAM197Y1-201ENST00000421178 764 ntBASIC17.15■□□□□ 0.34
PARPBPQ9NWS1 AL355355.2-201ENST00000442321 338 ntBASIC17.15■□□□□ 0.34
PARPBPQ9NWS1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PARPBPQ9NWS1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.15■□□□□ 0.34
PARPBPQ9NWS1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.15■□□□□ 0.34
PARPBPQ9NWS1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.15■□□□□ 0.34
PARPBPQ9NWS1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.15■□□□□ 0.34
PARPBPQ9NWS1 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.15■□□□□ 0.34
PARPBPQ9NWS1 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
PARPBPQ9NWS1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PARPBPQ9NWS1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PARPBPQ9NWS1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PARPBPQ9NWS1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PARPBPQ9NWS1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
PARPBPQ9NWS1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PARPBPQ9NWS1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.15■□□□□ 0.34
PARPBPQ9NWS1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PARPBPQ9NWS1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PARPBPQ9NWS1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.15■□□□□ 0.34
PARPBPQ9NWS1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
PARPBPQ9NWS1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PARPBPQ9NWS1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PARPBPQ9NWS1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PARPBPQ9NWS1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PARPBPQ9NWS1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PARPBPQ9NWS1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.14■□□□□ 0.33
PARPBPQ9NWS1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PARPBPQ9NWS1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PARPBPQ9NWS1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PARPBPQ9NWS1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PARPBPQ9NWS1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
PARPBPQ9NWS1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PARPBPQ9NWS1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.14■□□□□ 0.33
PARPBPQ9NWS1 MIR4785-201ENST00000585005 73 ntBASIC17.14■□□□□ 0.33
PARPBPQ9NWS1 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.14■□□□□ 0.33
PARPBPQ9NWS1 AC113410.3-201ENST00000623366 203 ntBASIC17.14■□□□□ 0.33
PARPBPQ9NWS1 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PARPBPQ9NWS1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.14■□□□□ 0.33
PARPBPQ9NWS1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PARPBPQ9NWS1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PARPBPQ9NWS1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
PARPBPQ9NWS1 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
PARPBPQ9NWS1 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PARPBPQ9NWS1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PARPBPQ9NWS1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PARPBPQ9NWS1 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms