Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13DQ5THJ4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13DQ5THJ4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
VPS13DQ5THJ4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
VPS13DQ5THJ4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.93□□□□□ -0.34
VPS13DQ5THJ4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13DQ5THJ4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
VPS13DQ5THJ4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VPS13DQ5THJ4 LINC00167-201ENST00000530583 1419 ntBASIC12.93□□□□□ -0.34
VPS13DQ5THJ4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13DQ5THJ4 TSPY19P-201ENST00000418461 509 ntBASIC12.92□□□□□ -0.34
VPS13DQ5THJ4 TSPY18P-201ENST00000441642 509 ntBASIC12.92□□□□□ -0.34
VPS13DQ5THJ4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC12.92□□□□□ -0.34
VPS13DQ5THJ4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13DQ5THJ4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13DQ5THJ4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13DQ5THJ4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13DQ5THJ4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13DQ5THJ4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13DQ5THJ4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC12.92□□□□□ -0.34
VPS13DQ5THJ4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
VPS13DQ5THJ4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13DQ5THJ4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
VPS13DQ5THJ4 AC139530.3-201ENST00000620344 690 ntBASIC12.92□□□□□ -0.34
VPS13DQ5THJ4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13DQ5THJ4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
VPS13DQ5THJ4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC12.92□□□□□ -0.34
VPS13DQ5THJ4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13DQ5THJ4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13DQ5THJ4 AL023284.2-201ENST00000405850 579 ntBASIC12.92□□□□□ -0.34
VPS13DQ5THJ4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13DQ5THJ4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
VPS13DQ5THJ4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13DQ5THJ4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13DQ5THJ4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
VPS13DQ5THJ4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13DQ5THJ4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13DQ5THJ4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VPS13DQ5THJ4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 AL162741.1-201ENST00000565563 1558 ntBASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 AC079834.2-201ENST00000609776 1949 ntBASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 KRT18P31-201ENST00000506277 1292 ntBASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 AC011498.5-201ENST00000592027 486 ntBASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VPS13DQ5THJ4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC12.9□□□□□ -0.34
VPS13DQ5THJ4 TSPY12P-201ENST00000421279 868 ntBASIC12.9□□□□□ -0.34
VPS13DQ5THJ4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.9□□□□□ -0.34
VPS13DQ5THJ4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.9□□□□□ -0.34
VPS13DQ5THJ4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13DQ5THJ4 KRT18P1-202ENST00000452408 1331 ntBASIC12.9□□□□□ -0.34
VPS13DQ5THJ4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13DQ5THJ4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC12.9□□□□□ -0.34
VPS13DQ5THJ4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13DQ5THJ4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
VPS13DQ5THJ4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC12.9□□□□□ -0.34
VPS13DQ5THJ4 TOB2P1-201ENST00000469761 992 ntBASIC12.9□□□□□ -0.34
VPS13DQ5THJ4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13DQ5THJ4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC12.9□□□□□ -0.34
VPS13DQ5THJ4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13DQ5THJ4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13DQ5THJ4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13DQ5THJ4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13DQ5THJ4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13DQ5THJ4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13DQ5THJ4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
VPS13DQ5THJ4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13DQ5THJ4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC12.9□□□□□ -0.34
VPS13DQ5THJ4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13DQ5THJ4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VPS13DQ5THJ4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC12.9□□□□□ -0.34
VPS13DQ5THJ4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms