Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 CD99P1-205ENST00000527459 561 ntBASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 AC006557.6-201ENST00000623071 864 ntBASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.63■□□□□ 0.25
ATPAF1Q5TC12 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 SOX15-203ENST00000570788 1093 ntBASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.62■□□□□ 0.25
ATPAF1Q5TC12 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 AC020763.4-201ENST00000623414 4170 ntBASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 AC026366.1-201ENST00000488803 879 ntBASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 AC008687.6-201ENST00000596318 630 ntBASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF1Q5TC12 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms