Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCP4P48539 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCP4P48539 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCP4P48539 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PCP4P48539 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCP4P48539 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCP4P48539 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC13.29□□□□□ -0.28
PCP4P48539 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC13.29□□□□□ -0.28
PCP4P48539 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCP4P48539 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC13.29□□□□□ -0.28
PCP4P48539 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCP4P48539 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCP4P48539 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
PCP4P48539 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCP4P48539 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
PCP4P48539 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCP4P48539 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
PCP4P48539 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCP4P48539 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PCP4P48539 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PCP4P48539 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC13.28□□□□□ -0.28
PCP4P48539 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PCP4P48539 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC13.28□□□□□ -0.28
PCP4P48539 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PCP4P48539 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PCP4P48539 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
PCP4P48539 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PCP4P48539 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
PCP4P48539 AC073592.3-201ENST00000625118 1834 ntBASIC13.28□□□□□ -0.28
PCP4P48539 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PCP4P48539 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
PCP4P48539 Z82202.1-201ENST00000623446 1880 ntBASIC13.28□□□□□ -0.28
PCP4P48539 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PCP4P48539 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC13.28□□□□□ -0.28
PCP4P48539 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PCP4P48539 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PCP4P48539 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PCP4P48539 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
PCP4P48539 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PCP4P48539 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PCP4P48539 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
PCP4P48539 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PCP4P48539 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.28□□□□□ -0.28
PCP4P48539 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PCP4P48539 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PCP4P48539 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PCP4P48539 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PCP4P48539 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.28□□□□□ -0.28
PCP4P48539 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PCP4P48539 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
PCP4P48539 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
PCP4P48539 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.27□□□□□ -0.28
PCP4P48539 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.27□□□□□ -0.28
PCP4P48539 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
PCP4P48539 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PCP4P48539 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
PCP4P48539 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
PCP4P48539 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
PCP4P48539 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PCP4P48539 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
PCP4P48539 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PCP4P48539 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC13.27□□□□□ -0.29
PCP4P48539 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
PCP4P48539 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PCP4P48539 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PCP4P48539 AC118758.2-201ENST00000614242 2813 ntBASIC13.27□□□□□ -0.29
PCP4P48539 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PCP4P48539 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PCP4P48539 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
PCP4P48539 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
PCP4P48539 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.27□□□□□ -0.29
PCP4P48539 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.27□□□□□ -0.29
PCP4P48539 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
PCP4P48539 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
PCP4P48539 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
PCP4P48539 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
PCP4P48539 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
PCP4P48539 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PCP4P48539 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PCP4P48539 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PCP4P48539 GATB-213ENST00000515812 1893 ntTSL 5 BASIC13.27□□□□□ -0.29
PCP4P48539 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
PCP4P48539 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC13.27□□□□□ -0.29
PCP4P48539 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC13.27□□□□□ -0.29
PCP4P48539 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PCP4P48539 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PCP4P48539 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PCP4P48539 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.27□□□□□ -0.29
PCP4P48539 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC13.27□□□□□ -0.29
PCP4P48539 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
PCP4P48539 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
PCP4P48539 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCP4P48539 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
PCP4P48539 AC007686.3-201ENST00000619017 3487 ntBASIC13.26□□□□□ -0.29
PCP4P48539 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
PCP4P48539 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCP4P48539 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCP4P48539 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCP4P48539 ESPNP-201ENST00000270691 2015 ntBASIC13.26□□□□□ -0.29
PCP4P48539 CD276-201ENST00000318424 2738 ntTSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms