Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AL133373.2-201ENST00000623187 2828 ntBASIC19.39■□□□□ 0.69
RPA3P35244 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPA3P35244 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RPA3P35244 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPA3P35244 AC079598.2-202ENST00000546624 1451 ntBASIC19.39■□□□□ 0.69
RPA3P35244 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPA3P35244 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
RPA3P35244 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPA3P35244 FP475955.4-201ENST00000623131 1990 ntBASIC19.39■□□□□ 0.69
RPA3P35244 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.39■□□□□ 0.69
RPA3P35244 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPA3P35244 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPA3P35244 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPA3P35244 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.38■□□□□ 0.69
RPA3P35244 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPA3P35244 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPA3P35244 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPA3P35244 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPA3P35244 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPA3P35244 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPA3P35244 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPA3P35244 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.38■□□□□ 0.69
RPA3P35244 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.38■□□□□ 0.69
RPA3P35244 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPA3P35244 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.38■□□□□ 0.69
RPA3P35244 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RPA3P35244 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RPA3P35244 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.38■□□□□ 0.69
RPA3P35244 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPA3P35244 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.38■□□□□ 0.69
RPA3P35244 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.38■□□□□ 0.69
RPA3P35244 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.38■□□□□ 0.69
RPA3P35244 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.38■□□□□ 0.69
RPA3P35244 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RPA3P35244 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.38■□□□□ 0.69
RPA3P35244 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPA3P35244 AC018553.1-201ENST00000616682 1458 ntBASIC19.38■□□□□ 0.69
RPA3P35244 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPA3P35244 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.38■□□□□ 0.69
RPA3P35244 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RPA3P35244 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPA3P35244 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RPA3P35244 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPA3P35244 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
RPA3P35244 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPA3P35244 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RPA3P35244 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPA3P35244 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPA3P35244 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.37■□□□□ 0.69
RPA3P35244 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.37■□□□□ 0.69
RPA3P35244 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPA3P35244 RNA5SP413-201ENST00000516373 109 ntBASIC19.37■□□□□ 0.69
RPA3P35244 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPA3P35244 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPA3P35244 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPA3P35244 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.37■□□□□ 0.69
RPA3P35244 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RPA3P35244 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RPA3P35244 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RPA3P35244 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RPA3P35244 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPA3P35244 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.36■□□□□ 0.69
RPA3P35244 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RPA3P35244 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.36■□□□□ 0.69
RPA3P35244 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPA3P35244 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPA3P35244 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPA3P35244 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.36■□□□□ 0.69
RPA3P35244 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPA3P35244 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPA3P35244 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPA3P35244 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPA3P35244 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPA3P35244 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.36■□□□□ 0.69
RPA3P35244 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.36■□□□□ 0.69
RPA3P35244 KRT18P6-201ENST00000555540 1265 ntBASIC19.36■□□□□ 0.69
RPA3P35244 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPA3P35244 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPA3P35244 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.36■□□□□ 0.69
RPA3P35244 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPA3P35244 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.36■□□□□ 0.69
RPA3P35244 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPA3P35244 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPA3P35244 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
RPA3P35244 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPA3P35244 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPA3P35244 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.36■□□□□ 0.69
RPA3P35244 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.36■□□□□ 0.69
RPA3P35244 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPA3P35244 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
RPA3P35244 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPA3P35244 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPA3P35244 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPA3P35244 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPA3P35244 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.35■□□□□ 0.69
RPA3P35244 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.35■□□□□ 0.69
RPA3P35244 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPA3P35244 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPA3P35244 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.35■□□□□ 0.69
RPA3P35244 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms