Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.93■□□□□ 0.46
HCN1O60741 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HCN1O60741 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HCN1O60741 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.93■□□□□ 0.46
HCN1O60741 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.93■□□□□ 0.46
HCN1O60741 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HCN1O60741 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HCN1O60741 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HCN1O60741 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
HCN1O60741 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HCN1O60741 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.93■□□□□ 0.46
HCN1O60741 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
HCN1O60741 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.93■□□□□ 0.46
HCN1O60741 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
HCN1O60741 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
HCN1O60741 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
HCN1O60741 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.92■□□□□ 0.46
HCN1O60741 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HCN1O60741 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HCN1O60741 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HCN1O60741 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HCN1O60741 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HCN1O60741 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HCN1O60741 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HCN1O60741 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HCN1O60741 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HCN1O60741 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HCN1O60741 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.92■□□□□ 0.46
HCN1O60741 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.92■□□□□ 0.46
HCN1O60741 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HCN1O60741 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HCN1O60741 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.92■□□□□ 0.46
HCN1O60741 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.92■□□□□ 0.46
HCN1O60741 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.92■□□□□ 0.46
HCN1O60741 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.92■□□□□ 0.46
HCN1O60741 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HCN1O60741 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HCN1O60741 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HCN1O60741 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HCN1O60741 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.92■□□□□ 0.46
HCN1O60741 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.92■□□□□ 0.46
HCN1O60741 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
HCN1O60741 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.92■□□□□ 0.46
HCN1O60741 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HCN1O60741 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HCN1O60741 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HCN1O60741 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCN1O60741 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.91■□□□□ 0.46
HCN1O60741 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCN1O60741 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.91■□□□□ 0.46
HCN1O60741 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCN1O60741 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCN1O60741 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCN1O60741 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCN1O60741 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.91■□□□□ 0.46
HCN1O60741 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCN1O60741 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
HCN1O60741 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCN1O60741 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.91■□□□□ 0.46
HCN1O60741 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HCN1O60741 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.91■□□□□ 0.46
HCN1O60741 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.91■□□□□ 0.46
HCN1O60741 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.91■□□□□ 0.46
HCN1O60741 MIR4785-201ENST00000585005 73 ntBASIC17.91■□□□□ 0.46
HCN1O60741 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.91■□□□□ 0.46
HCN1O60741 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HCN1O60741 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCN1O60741 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.91■□□□□ 0.46
HCN1O60741 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCN1O60741 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCN1O60741 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.91■□□□□ 0.46
HCN1O60741 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCN1O60741 HTR7P1-201ENST00000538670 1336 ntBASIC17.91■□□□□ 0.46
HCN1O60741 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCN1O60741 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCN1O60741 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HCN1O60741 AC020763.4-201ENST00000623414 4170 ntBASIC17.91■□□□□ 0.46
HCN1O60741 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HCN1O60741 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HCN1O60741 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HCN1O60741 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.9■□□□□ 0.46
HCN1O60741 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HCN1O60741 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HCN1O60741 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HCN1O60741 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HCN1O60741 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.9■□□□□ 0.46
HCN1O60741 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.9■□□□□ 0.46
HCN1O60741 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HCN1O60741 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.9■□□□□ 0.46
HCN1O60741 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HCN1O60741 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.9■□□□□ 0.46
HCN1O60741 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HCN1O60741 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.9■□□□□ 0.46
HCN1O60741 AC113410.3-201ENST00000623366 203 ntBASIC17.9■□□□□ 0.46
HCN1O60741 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HCN1O60741 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.9■□□□□ 0.46
HCN1O60741 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.9■□□□□ 0.46
HCN1O60741 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HCN1O60741 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HCN1O60741 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms