Protein–RNA interactions for Protein: A6NNY8

USP27X, Ubiquitin carboxyl-terminal hydrolase 27, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP27XA6NNY8 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.72■□□□□ 0.91
USP27XA6NNY8 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.72■□□□□ 0.91
USP27XA6NNY8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP27XA6NNY8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP27XA6NNY8 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.71■□□□□ 0.91
USP27XA6NNY8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP27XA6NNY8 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.71■□□□□ 0.91
USP27XA6NNY8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP27XA6NNY8 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP27XA6NNY8 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
USP27XA6NNY8 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP27XA6NNY8 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP27XA6NNY8 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP27XA6NNY8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP27XA6NNY8 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP27XA6NNY8 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
USP27XA6NNY8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP27XA6NNY8 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.71■□□□□ 0.91
USP27XA6NNY8 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP27XA6NNY8 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.71■□□□□ 0.91
USP27XA6NNY8 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
USP27XA6NNY8 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.71■□□□□ 0.91
USP27XA6NNY8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP27XA6NNY8 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP27XA6NNY8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.71■□□□□ 0.91
USP27XA6NNY8 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.7■□□□□ 0.9
USP27XA6NNY8 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.7■□□□□ 0.9
USP27XA6NNY8 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
USP27XA6NNY8 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP27XA6NNY8 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP27XA6NNY8 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
USP27XA6NNY8 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP27XA6NNY8 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP27XA6NNY8 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.7■□□□□ 0.9
USP27XA6NNY8 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.7■□□□□ 0.9
USP27XA6NNY8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.7■□□□□ 0.9
USP27XA6NNY8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.7■□□□□ 0.9
USP27XA6NNY8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.7■□□□□ 0.9
USP27XA6NNY8 AL162412.1-201ENST00000567129 965 ntBASIC20.7■□□□□ 0.9
USP27XA6NNY8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.7■□□□□ 0.9
USP27XA6NNY8 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
USP27XA6NNY8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP27XA6NNY8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP27XA6NNY8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.7■□□□□ 0.9
USP27XA6NNY8 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
USP27XA6NNY8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
USP27XA6NNY8 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.7■□□□□ 0.9
USP27XA6NNY8 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP27XA6NNY8 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
USP27XA6NNY8 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP27XA6NNY8 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP27XA6NNY8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
USP27XA6NNY8 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP27XA6NNY8 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.69■□□□□ 0.9
USP27XA6NNY8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP27XA6NNY8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP27XA6NNY8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
USP27XA6NNY8 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP27XA6NNY8 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP27XA6NNY8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP27XA6NNY8 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP27XA6NNY8 KRT18P68-201ENST00000392293 1000 ntBASIC20.69■□□□□ 0.9
USP27XA6NNY8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.69■□□□□ 0.9
USP27XA6NNY8 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.69■□□□□ 0.9
USP27XA6NNY8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP27XA6NNY8 KRT18P14-201ENST00000534205 1250 ntBASIC20.69■□□□□ 0.9
USP27XA6NNY8 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.69■□□□□ 0.9
USP27XA6NNY8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.69■□□□□ 0.9
USP27XA6NNY8 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP27XA6NNY8 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP27XA6NNY8 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP27XA6NNY8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP27XA6NNY8 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
USP27XA6NNY8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP27XA6NNY8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP27XA6NNY8 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP27XA6NNY8 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP27XA6NNY8 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP27XA6NNY8 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP27XA6NNY8 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.69■□□□□ 0.9
USP27XA6NNY8 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.68■□□□□ 0.9
USP27XA6NNY8 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.68■□□□□ 0.9
USP27XA6NNY8 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP27XA6NNY8 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP27XA6NNY8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP27XA6NNY8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP27XA6NNY8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP27XA6NNY8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.68■□□□□ 0.9
USP27XA6NNY8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.68■□□□□ 0.9
USP27XA6NNY8 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.68■□□□□ 0.9
USP27XA6NNY8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP27XA6NNY8 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP27XA6NNY8 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.68■□□□□ 0.9
USP27XA6NNY8 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP27XA6NNY8 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP27XA6NNY8 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP27XA6NNY8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP27XA6NNY8 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP27XA6NNY8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP27XA6NNY8 LINC00896-202ENST00000609602 2128 ntBASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms