Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRCOL1A6NCL2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LRCOL1A6NCL2 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
LRCOL1A6NCL2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
LRCOL1A6NCL2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 AC012306.2-201ENST00000609350 630 ntBASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 AC131212.4-201ENST00000623606 975 ntBASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 AC133561.5-201ENST00000635547 218 ntBASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 AC099778.1-201ENST00000568593 1911 ntBASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 FSCN1P1-201ENST00000568912 1481 ntBASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRCOL1A6NCL2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 MESTP1-201ENST00000404287 994 ntBASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 NME1-207ENST00000480143 964 ntTSL 2 BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 AP000525.1-201ENST00000608286 694 ntBASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 AC097493.4-201ENST00000641197 219 ntBASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 AC007952.6-201ENST00000573168 2673 ntBASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 AC003957.1-201ENST00000625108 2673 ntBASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRCOL1A6NCL2 LINC01006-201ENST00000333319 2292 ntBASIC12.83□□□□□ -0.35
LRCOL1A6NCL2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LRCOL1A6NCL2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC12.83□□□□□ -0.35
LRCOL1A6NCL2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
LRCOL1A6NCL2 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRCOL1A6NCL2 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC12.83□□□□□ -0.36
LRCOL1A6NCL2 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRCOL1A6NCL2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LRCOL1A6NCL2 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LRCOL1A6NCL2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC12.83□□□□□ -0.36
LRCOL1A6NCL2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
LRCOL1A6NCL2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRCOL1A6NCL2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRCOL1A6NCL2 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRCOL1A6NCL2 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRCOL1A6NCL2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms