Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC12.68□□□□□ -0.38
TRAV13-2A0A0B4J235 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV13-2A0A0B4J235 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
TRAV13-2A0A0B4J235 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV13-2A0A0B4J235 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC12.68□□□□□ -0.38
TRAV13-2A0A0B4J235 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC12.68□□□□□ -0.38
TRAV13-2A0A0B4J235 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TRAV13-2A0A0B4J235 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
TRAV13-2A0A0B4J235 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
TRAV13-2A0A0B4J235 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV13-2A0A0B4J235 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV13-2A0A0B4J235 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV13-2A0A0B4J235 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC12.68□□□□□ -0.38
TRAV13-2A0A0B4J235 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV13-2A0A0B4J235 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
TRAV13-2A0A0B4J235 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
TRAV13-2A0A0B4J235 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV13-2A0A0B4J235 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
TRAV13-2A0A0B4J235 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV13-2A0A0B4J235 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV13-2A0A0B4J235 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV13-2A0A0B4J235 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC12.67□□□□□ -0.38
TRAV13-2A0A0B4J235 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC12.67□□□□□ -0.38
TRAV13-2A0A0B4J235 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
TRAV13-2A0A0B4J235 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC12.67□□□□□ -0.38
TRAV13-2A0A0B4J235 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC12.67□□□□□ -0.38
TRAV13-2A0A0B4J235 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV13-2A0A0B4J235 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV13-2A0A0B4J235 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV13-2A0A0B4J235 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC12.67□□□□□ -0.38
TRAV13-2A0A0B4J235 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV13-2A0A0B4J235 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
TRAV13-2A0A0B4J235 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV13-2A0A0B4J235 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV13-2A0A0B4J235 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
TRAV13-2A0A0B4J235 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC12.67□□□□□ -0.38
TRAV13-2A0A0B4J235 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV13-2A0A0B4J235 TEX21P-204ENST00000641479 1693 ntBASIC12.67□□□□□ -0.38
TRAV13-2A0A0B4J235 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV13-2A0A0B4J235 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
TRAV13-2A0A0B4J235 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV13-2A0A0B4J235 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
TRAV13-2A0A0B4J235 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 AC097381.1-201ENST00000429019 1296 ntBASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 CREM-229ENST00000474362 1030 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 AC138907.5-202ENST00000569484 235 ntBASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 RASSF1-AS1-201ENST00000629828 790 ntBASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 AL512353.2-201ENST00000448759 1962 ntBASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV13-2A0A0B4J235 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 FP475955.4-201ENST00000623131 1990 ntBASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 MADD-208ENST00000405573 1823 ntTSL 5 BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV13-2A0A0B4J235 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms