Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB3Q9Y5G1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB3Q9Y5G1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB3Q9Y5G1 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB3Q9Y5G1 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB3Q9Y5G1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGB3Q9Y5G1 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGB3Q9Y5G1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PCDHGB3Q9Y5G1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGB3Q9Y5G1 AL138781.2-201ENST00000617896 1843 ntBASIC18.21■□□□□ 0.51
PCDHGB3Q9Y5G1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB3Q9Y5G1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB3Q9Y5G1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
PCDHGB3Q9Y5G1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB3Q9Y5G1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGB3Q9Y5G1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHGB3Q9Y5G1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGB3Q9Y5G1 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
PCDHGB3Q9Y5G1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDHGB3Q9Y5G1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB3Q9Y5G1 RN7SL471P-201ENST00000580476 299 ntBASIC18.21■□□□□ 0.51
PCDHGB3Q9Y5G1 AL121829.2-201ENST00000620908 328 ntBASIC18.21■□□□□ 0.51
PCDHGB3Q9Y5G1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB3Q9Y5G1 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
PCDHGB3Q9Y5G1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PCDHGB3Q9Y5G1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB3Q9Y5G1 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PCDHGB3Q9Y5G1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGB3Q9Y5G1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
PCDHGB3Q9Y5G1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB3Q9Y5G1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
PCDHGB3Q9Y5G1 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB3Q9Y5G1 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB3Q9Y5G1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB3Q9Y5G1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB3Q9Y5G1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDHGB3Q9Y5G1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB3Q9Y5G1 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB3Q9Y5G1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PCDHGB3Q9Y5G1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB3Q9Y5G1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PCDHGB3Q9Y5G1 AP006587.1-201ENST00000534129 1502 ntBASIC18.2■□□□□ 0.5
PCDHGB3Q9Y5G1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB3Q9Y5G1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB3Q9Y5G1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHGB3Q9Y5G1 AL158047.1-201ENST00000445918 881 ntBASIC18.2■□□□□ 0.5
PCDHGB3Q9Y5G1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDHGB3Q9Y5G1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGB3Q9Y5G1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
PCDHGB3Q9Y5G1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGB3Q9Y5G1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB3Q9Y5G1 AL359736.2-201ENST00000621992 437 ntBASIC18.2■□□□□ 0.5
PCDHGB3Q9Y5G1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB3Q9Y5G1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
PCDHGB3Q9Y5G1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB3Q9Y5G1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB3Q9Y5G1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB3Q9Y5G1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB3Q9Y5G1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB3Q9Y5G1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB3Q9Y5G1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB3Q9Y5G1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB3Q9Y5G1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB3Q9Y5G1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PCDHGB3Q9Y5G1 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB3Q9Y5G1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB3Q9Y5G1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB3Q9Y5G1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 158.6 ms