Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC12.81□□□□□ -0.36
LITAFQ99732 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC12.81□□□□□ -0.36
LITAFQ99732 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC12.81□□□□□ -0.36
LITAFQ99732 RARRES2P1-201ENST00000474487 481 ntBASIC12.81□□□□□ -0.36
LITAFQ99732 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC12.81□□□□□ -0.36
LITAFQ99732 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC12.81□□□□□ -0.36
LITAFQ99732 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC12.81□□□□□ -0.36
LITAFQ99732 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC12.81□□□□□ -0.36
LITAFQ99732 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC12.81□□□□□ -0.36
LITAFQ99732 AC083906.6-201ENST00000641366 219 ntBASIC12.81□□□□□ -0.36
LITAFQ99732 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC12.81□□□□□ -0.36
LITAFQ99732 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LITAFQ99732 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LITAFQ99732 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LITAFQ99732 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
LITAFQ99732 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
LITAFQ99732 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC12.81□□□□□ -0.36
LITAFQ99732 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC12.81□□□□□ -0.36
LITAFQ99732 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LITAFQ99732 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LITAFQ99732 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LITAFQ99732 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LITAFQ99732 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LITAFQ99732 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LITAFQ99732 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LITAFQ99732 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
LITAFQ99732 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC12.8□□□□□ -0.36
LITAFQ99732 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LITAFQ99732 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LITAFQ99732 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
LITAFQ99732 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LITAFQ99732 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LITAFQ99732 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LITAFQ99732 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
LITAFQ99732 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC12.8□□□□□ -0.36
LITAFQ99732 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LITAFQ99732 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LITAFQ99732 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LITAFQ99732 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LITAFQ99732 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LITAFQ99732 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC12.8□□□□□ -0.36
LITAFQ99732 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC12.8□□□□□ -0.36
LITAFQ99732 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC12.8□□□□□ -0.36
LITAFQ99732 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC12.8□□□□□ -0.36
LITAFQ99732 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LITAFQ99732 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LITAFQ99732 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
LITAFQ99732 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LITAFQ99732 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
LITAFQ99732 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LITAFQ99732 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LITAFQ99732 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
LITAFQ99732 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LITAFQ99732 COBL-210ENST00000632460 1941 ntTSL 5 BASIC12.8□□□□□ -0.36
LITAFQ99732 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LITAFQ99732 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LITAFQ99732 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LITAFQ99732 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LITAFQ99732 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LITAFQ99732 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
LITAFQ99732 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LITAFQ99732 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC12.79□□□□□ -0.36
LITAFQ99732 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LITAFQ99732 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
LITAFQ99732 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LITAFQ99732 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC12.79□□□□□ -0.36
LITAFQ99732 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LITAFQ99732 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
LITAFQ99732 UBQLN4P1-201ENST00000461599 1801 ntBASIC12.79□□□□□ -0.36
LITAFQ99732 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LITAFQ99732 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LITAFQ99732 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC12.79□□□□□ -0.36
LITAFQ99732 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
LITAFQ99732 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LITAFQ99732 HLA-G-202ENST00000376815 851 ntBASIC12.79□□□□□ -0.36
LITAFQ99732 HLA-G-203ENST00000376818 1127 ntBASIC12.79□□□□□ -0.36
LITAFQ99732 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LITAFQ99732 AC099791.1-201ENST00000416440 715 ntBASIC12.79□□□□□ -0.36
LITAFQ99732 YBX1P1-201ENST00000445822 960 ntBASIC12.79□□□□□ -0.36
LITAFQ99732 KRT18P20-201ENST00000548986 1279 ntBASIC12.79□□□□□ -0.36
LITAFQ99732 AC008764.7-201ENST00000593779 1081 ntBASIC12.79□□□□□ -0.36
LITAFQ99732 AP001160.3-201ENST00000601484 763 ntBASIC12.79□□□□□ -0.36
LITAFQ99732 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LITAFQ99732 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
LITAFQ99732 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LITAFQ99732 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LITAFQ99732 AC012317.2-201ENST00000623305 2251 ntBASIC12.79□□□□□ -0.36
LITAFQ99732 AC084018.2-201ENST00000613093 2607 ntBASIC12.79□□□□□ -0.36
LITAFQ99732 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LITAFQ99732 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LITAFQ99732 SDHAP1-207ENST00000440850 2000 ntBASIC12.79□□□□□ -0.36
LITAFQ99732 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LITAFQ99732 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LITAFQ99732 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
LITAFQ99732 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LITAFQ99732 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LITAFQ99732 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
LITAFQ99732 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LITAFQ99732 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LITAFQ99732 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms