Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST3H2BBQ8N257 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HIST3H2BBQ8N257 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC14.4□□□□□ -0.1
HIST3H2BBQ8N257 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HIST3H2BBQ8N257 IDNK-203ENST00000405990 629 ntTSL 2 BASIC14.4□□□□□ -0.1
HIST3H2BBQ8N257 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HIST3H2BBQ8N257 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC14.4□□□□□ -0.1
HIST3H2BBQ8N257 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST3H2BBQ8N257 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.4□□□□□ -0.1
HIST3H2BBQ8N257 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.4□□□□□ -0.1
HIST3H2BBQ8N257 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HIST3H2BBQ8N257 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST3H2BBQ8N257 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
HIST3H2BBQ8N257 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST3H2BBQ8N257 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST3H2BBQ8N257 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST3H2BBQ8N257 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
HIST3H2BBQ8N257 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HIST3H2BBQ8N257 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.39□□□□□ -0.11
HIST3H2BBQ8N257 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HIST3H2BBQ8N257 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
HIST3H2BBQ8N257 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.39□□□□□ -0.11
HIST3H2BBQ8N257 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
HIST3H2BBQ8N257 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.39□□□□□ -0.11
HIST3H2BBQ8N257 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST3H2BBQ8N257 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST3H2BBQ8N257 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.39□□□□□ -0.11
HIST3H2BBQ8N257 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST3H2BBQ8N257 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HIST3H2BBQ8N257 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
HIST3H2BBQ8N257 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST3H2BBQ8N257 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HIST3H2BBQ8N257 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST3H2BBQ8N257 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST3H2BBQ8N257 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HIST3H2BBQ8N257 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
HIST3H2BBQ8N257 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC14.39□□□□□ -0.11
HIST3H2BBQ8N257 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST3H2BBQ8N257 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.39□□□□□ -0.11
HIST3H2BBQ8N257 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST3H2BBQ8N257 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST3H2BBQ8N257 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HIST3H2BBQ8N257 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST3H2BBQ8N257 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST3H2BBQ8N257 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST3H2BBQ8N257 TEX21P-204ENST00000641479 1693 ntBASIC14.39□□□□□ -0.11
HIST3H2BBQ8N257 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.39□□□□□ -0.11
HIST3H2BBQ8N257 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST3H2BBQ8N257 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HIST3H2BBQ8N257 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC14.38□□□□□ -0.11
HIST3H2BBQ8N257 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST3H2BBQ8N257 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST3H2BBQ8N257 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST3H2BBQ8N257 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST3H2BBQ8N257 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST3H2BBQ8N257 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST3H2BBQ8N257 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST3H2BBQ8N257 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST3H2BBQ8N257 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST3H2BBQ8N257 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HIST3H2BBQ8N257 SLC25A6P5-201ENST00000435663 894 ntBASIC14.38□□□□□ -0.11
HIST3H2BBQ8N257 RBM38-205ENST00000440234 686 ntTSL 2 BASIC14.38□□□□□ -0.11
HIST3H2BBQ8N257 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC14.38□□□□□ -0.11
HIST3H2BBQ8N257 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC14.38□□□□□ -0.11
HIST3H2BBQ8N257 SNX5-217ENST00000606557 1087 ntBASIC14.38□□□□□ -0.11
HIST3H2BBQ8N257 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
HIST3H2BBQ8N257 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST3H2BBQ8N257 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
HIST3H2BBQ8N257 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HIST3H2BBQ8N257 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HIST3H2BBQ8N257 AC005703.6-201ENST00000623265 1329 ntBASIC14.38□□□□□ -0.11
HIST3H2BBQ8N257 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST3H2BBQ8N257 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST3H2BBQ8N257 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST3H2BBQ8N257 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST3H2BBQ8N257 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST3H2BBQ8N257 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.38□□□□□ -0.11
HIST3H2BBQ8N257 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
HIST3H2BBQ8N257 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HIST3H2BBQ8N257 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.37□□□□□ -0.11
HIST3H2BBQ8N257 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HIST3H2BBQ8N257 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST3H2BBQ8N257 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HIST3H2BBQ8N257 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
HIST3H2BBQ8N257 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.37□□□□□ -0.11
HIST3H2BBQ8N257 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC14.37□□□□□ -0.11
HIST3H2BBQ8N257 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST3H2BBQ8N257 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.37□□□□□ -0.11
HIST3H2BBQ8N257 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HIST3H2BBQ8N257 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HIST3H2BBQ8N257 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
HIST3H2BBQ8N257 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HIST3H2BBQ8N257 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.37□□□□□ -0.11
HIST3H2BBQ8N257 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST3H2BBQ8N257 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC14.37□□□□□ -0.11
HIST3H2BBQ8N257 AC087239.1-201ENST00000622671 572 ntBASIC14.37□□□□□ -0.11
HIST3H2BBQ8N257 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST3H2BBQ8N257 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HIST3H2BBQ8N257 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST3H2BBQ8N257 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms