Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASC4Q6P4E1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CASC4Q6P4E1 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CASC4Q6P4E1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CASC4Q6P4E1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CASC4Q6P4E1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CASC4Q6P4E1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.59■□□□□ 0.73
CASC4Q6P4E1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CASC4Q6P4E1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CASC4Q6P4E1 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CASC4Q6P4E1 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CASC4Q6P4E1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CASC4Q6P4E1 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CASC4Q6P4E1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CASC4Q6P4E1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.59■□□□□ 0.73
CASC4Q6P4E1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CASC4Q6P4E1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CASC4Q6P4E1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CASC4Q6P4E1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CASC4Q6P4E1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.59■□□□□ 0.73
CASC4Q6P4E1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.59■□□□□ 0.73
CASC4Q6P4E1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.59■□□□□ 0.73
CASC4Q6P4E1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
CASC4Q6P4E1 AC120498.8-201ENST00000614275 531 ntBASIC19.59■□□□□ 0.73
CASC4Q6P4E1 AC133041.1-202ENST00000642053 222 ntBASIC19.59■□□□□ 0.73
CASC4Q6P4E1 AC141586.3-201ENST00000562166 1838 ntBASIC19.59■□□□□ 0.73
CASC4Q6P4E1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.59■□□□□ 0.73
CASC4Q6P4E1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CASC4Q6P4E1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CASC4Q6P4E1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.59■□□□□ 0.73
CASC4Q6P4E1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CASC4Q6P4E1 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CASC4Q6P4E1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
CASC4Q6P4E1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CASC4Q6P4E1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CASC4Q6P4E1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CASC4Q6P4E1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CASC4Q6P4E1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CASC4Q6P4E1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CASC4Q6P4E1 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CASC4Q6P4E1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.58■□□□□ 0.73
CASC4Q6P4E1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CASC4Q6P4E1 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CASC4Q6P4E1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CASC4Q6P4E1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
CASC4Q6P4E1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CASC4Q6P4E1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.58■□□□□ 0.72
CASC4Q6P4E1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.58■□□□□ 0.72
CASC4Q6P4E1 AC069152.1-201ENST00000438030 544 ntBASIC19.58■□□□□ 0.72
CASC4Q6P4E1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.58■□□□□ 0.72
CASC4Q6P4E1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.58■□□□□ 0.72
CASC4Q6P4E1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CASC4Q6P4E1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CASC4Q6P4E1 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CASC4Q6P4E1 KRT8P8-201ENST00000434750 1448 ntBASIC19.58■□□□□ 0.72
CASC4Q6P4E1 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CASC4Q6P4E1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CASC4Q6P4E1 AL049812.1-201ENST00000432563 2267 ntBASIC19.58■□□□□ 0.72
CASC4Q6P4E1 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.58■□□□□ 0.72
CASC4Q6P4E1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CASC4Q6P4E1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CASC4Q6P4E1 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.57■□□□□ 0.72
CASC4Q6P4E1 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CASC4Q6P4E1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms