Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX4Q33E94 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.88■□□□□ 0.45
RFX4Q33E94 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFX4Q33E94 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFX4Q33E94 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFX4Q33E94 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFX4Q33E94 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.88■□□□□ 0.45
RFX4Q33E94 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFX4Q33E94 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RFX4Q33E94 AC018470.1-201ENST00000624790 3129 ntBASIC17.88■□□□□ 0.45
RFX4Q33E94 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.88■□□□□ 0.45
RFX4Q33E94 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFX4Q33E94 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
RFX4Q33E94 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFX4Q33E94 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.88■□□□□ 0.45
RFX4Q33E94 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.88■□□□□ 0.45
RFX4Q33E94 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFX4Q33E94 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFX4Q33E94 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFX4Q33E94 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.88■□□□□ 0.45
RFX4Q33E94 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RFX4Q33E94 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
RFX4Q33E94 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.88■□□□□ 0.45
RFX4Q33E94 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFX4Q33E94 PCDHB18P-201ENST00000524813 2368 ntBASIC17.88■□□□□ 0.45
RFX4Q33E94 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RFX4Q33E94 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RFX4Q33E94 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.88■□□□□ 0.45
RFX4Q33E94 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.88■□□□□ 0.45
RFX4Q33E94 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFX4Q33E94 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RFX4Q33E94 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFX4Q33E94 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.87■□□□□ 0.45
RFX4Q33E94 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFX4Q33E94 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFX4Q33E94 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFX4Q33E94 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFX4Q33E94 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
RFX4Q33E94 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
RFX4Q33E94 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
RFX4Q33E94 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFX4Q33E94 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.87■□□□□ 0.45
RFX4Q33E94 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.87■□□□□ 0.45
RFX4Q33E94 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFX4Q33E94 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.87■□□□□ 0.45
RFX4Q33E94 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFX4Q33E94 AL355472.2-201ENST00000422958 438 ntBASIC17.87■□□□□ 0.45
RFX4Q33E94 CYP2T1P-201ENST00000432607 1285 ntBASIC17.87■□□□□ 0.45
RFX4Q33E94 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.87■□□□□ 0.45
RFX4Q33E94 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.87■□□□□ 0.45
RFX4Q33E94 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFX4Q33E94 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.87■□□□□ 0.45
RFX4Q33E94 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RFX4Q33E94 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.87■□□□□ 0.45
RFX4Q33E94 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFX4Q33E94 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.87■□□□□ 0.45
RFX4Q33E94 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFX4Q33E94 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFX4Q33E94 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RFX4Q33E94 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFX4Q33E94 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RFX4Q33E94 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RFX4Q33E94 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RFX4Q33E94 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFX4Q33E94 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFX4Q33E94 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
RFX4Q33E94 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RFX4Q33E94 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFX4Q33E94 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.86■□□□□ 0.45
RFX4Q33E94 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
RFX4Q33E94 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
RFX4Q33E94 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.86■□□□□ 0.45
RFX4Q33E94 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.86■□□□□ 0.45
RFX4Q33E94 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.86■□□□□ 0.45
RFX4Q33E94 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFX4Q33E94 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFX4Q33E94 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
RFX4Q33E94 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFX4Q33E94 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.86■□□□□ 0.45
RFX4Q33E94 AC023632.3-201ENST00000521633 145 ntBASIC17.86■□□□□ 0.45
RFX4Q33E94 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.86■□□□□ 0.45
RFX4Q33E94 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.86■□□□□ 0.45
RFX4Q33E94 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RFX4Q33E94 AC231657.2-201ENST00000624556 255 ntBASIC17.86■□□□□ 0.45
RFX4Q33E94 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFX4Q33E94 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.86■□□□□ 0.45
RFX4Q33E94 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RFX4Q33E94 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFX4Q33E94 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.86■□□□□ 0.45
RFX4Q33E94 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFX4Q33E94 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFX4Q33E94 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
RFX4Q33E94 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.86■□□□□ 0.45
RFX4Q33E94 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RFX4Q33E94 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RFX4Q33E94 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RFX4Q33E94 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.86■□□□□ 0.45
RFX4Q33E94 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RFX4Q33E94 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RFX4Q33E94 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms