Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP1B3P54709 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.67■□□□□ 0.26
ATP1B3P54709 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.67■□□□□ 0.26
ATP1B3P54709 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.67■□□□□ 0.26
ATP1B3P54709 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.67■□□□□ 0.26
ATP1B3P54709 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.67■□□□□ 0.26
ATP1B3P54709 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATP1B3P54709 HLA-B-256ENST00000639848 1089 ntBASIC16.67■□□□□ 0.26
ATP1B3P54709 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP1B3P54709 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.67■□□□□ 0.26
ATP1B3P54709 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP1B3P54709 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.67■□□□□ 0.26
ATP1B3P54709 AC092368.3-202ENST00000574180 1591 ntBASIC16.67■□□□□ 0.26
ATP1B3P54709 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
ATP1B3P54709 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP1B3P54709 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.67■□□□□ 0.26
ATP1B3P54709 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ATP1B3P54709 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.67■□□□□ 0.26
ATP1B3P54709 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
ATP1B3P54709 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP1B3P54709 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATP1B3P54709 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP1B3P54709 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATP1B3P54709 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
ATP1B3P54709 AL049812.1-201ENST00000432563 2267 ntBASIC16.66■□□□□ 0.26
ATP1B3P54709 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.66■□□□□ 0.26
ATP1B3P54709 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP1B3P54709 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP1B3P54709 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.66■□□□□ 0.26
ATP1B3P54709 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP1B3P54709 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.66■□□□□ 0.26
ATP1B3P54709 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.66■□□□□ 0.26
ATP1B3P54709 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.66■□□□□ 0.26
ATP1B3P54709 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.66■□□□□ 0.26
ATP1B3P54709 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.66■□□□□ 0.26
ATP1B3P54709 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP1B3P54709 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
ATP1B3P54709 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.66■□□□□ 0.26
ATP1B3P54709 AL121906.2-201ENST00000621597 723 ntBASIC16.66■□□□□ 0.26
ATP1B3P54709 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ATP1B3P54709 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ATP1B3P54709 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ATP1B3P54709 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP1B3P54709 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP1B3P54709 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ATP1B3P54709 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP1B3P54709 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP1B3P54709 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP1B3P54709 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP1B3P54709 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ATP1B3P54709 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP1B3P54709 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP1B3P54709 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP1B3P54709 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP1B3P54709 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP1B3P54709 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ATP1B3P54709 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ATP1B3P54709 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP1B3P54709 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ATP1B3P54709 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP1B3P54709 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ATP1B3P54709 LINC01465-201ENST00000408887 1940 ntBASIC16.65■□□□□ 0.26
ATP1B3P54709 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP1B3P54709 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP1B3P54709 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ATP1B3P54709 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP1B3P54709 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP1B3P54709 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP1B3P54709 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ATP1B3P54709 GUSBP6-202ENST00000438529 1198 ntBASIC16.65■□□□□ 0.26
ATP1B3P54709 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.65■□□□□ 0.26
ATP1B3P54709 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.65■□□□□ 0.26
ATP1B3P54709 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ATP1B3P54709 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP1B3P54709 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP1B3P54709 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP1B3P54709 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP1B3P54709 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP1B3P54709 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP1B3P54709 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP1B3P54709 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP1B3P54709 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP1B3P54709 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP1B3P54709 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
ATP1B3P54709 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
ATP1B3P54709 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP1B3P54709 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP1B3P54709 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP1B3P54709 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
ATP1B3P54709 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ATP1B3P54709 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.64■□□□□ 0.25
ATP1B3P54709 AC124283.5-201ENST00000624661 1809 ntBASIC16.64■□□□□ 0.25
ATP1B3P54709 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP1B3P54709 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
ATP1B3P54709 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP1B3P54709 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP1B3P54709 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP1B3P54709 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.64■□□□□ 0.25
ATP1B3P54709 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP1B3P54709 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms