Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
RPL13AP40429 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RPL13AP40429 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RPL13AP40429 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RPL13AP40429 SERBP1P1-201ENST00000396021 1160 ntBASIC13.27□□□□□ -0.29
RPL13AP40429 AC091305.1-201ENST00000479476 895 ntBASIC13.27□□□□□ -0.29
RPL13AP40429 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC13.27□□□□□ -0.29
RPL13AP40429 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
RPL13AP40429 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC13.27□□□□□ -0.29
RPL13AP40429 GRAMD4P4-201ENST00000613563 1115 ntBASIC13.27□□□□□ -0.29
RPL13AP40429 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC13.27□□□□□ -0.29
RPL13AP40429 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC13.27□□□□□ -0.29
RPL13AP40429 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
RPL13AP40429 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RPL13AP40429 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
RPL13AP40429 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
RPL13AP40429 STAC-204ENST00000457375 1366 ntTSL 2 BASIC13.27□□□□□ -0.29
RPL13AP40429 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RPL13AP40429 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC13.27□□□□□ -0.29
RPL13AP40429 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
RPL13AP40429 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RPL13AP40429 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RPL13AP40429 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC13.27□□□□□ -0.29
RPL13AP40429 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
RPL13AP40429 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RPL13AP40429 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RPL13AP40429 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RPL13AP40429 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC13.27□□□□□ -0.29
RPL13AP40429 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RPL13AP40429 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RPL13AP40429 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RPL13AP40429 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC13.27□□□□□ -0.29
RPL13AP40429 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RPL13AP40429 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RPL13AP40429 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
RPL13AP40429 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
RPL13AP40429 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RPL13AP40429 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC13.26□□□□□ -0.29
RPL13AP40429 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
RPL13AP40429 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RPL13AP40429 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RPL13AP40429 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RPL13AP40429 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RPL13AP40429 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RPL13AP40429 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RPL13AP40429 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RPL13AP40429 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RPL13AP40429 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RPL13AP40429 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RPL13AP40429 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RPL13AP40429 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RPL13AP40429 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC13.26□□□□□ -0.29
RPL13AP40429 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
RPL13AP40429 MIR4767-201ENST00000582827 78 ntBASIC13.26□□□□□ -0.29
RPL13AP40429 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RPL13AP40429 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RPL13AP40429 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RPL13AP40429 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC13.26□□□□□ -0.29
RPL13AP40429 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
RPL13AP40429 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
RPL13AP40429 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC13.26□□□□□ -0.29
RPL13AP40429 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
RPL13AP40429 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RPL13AP40429 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RPL13AP40429 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RPL13AP40429 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RPL13AP40429 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RPL13AP40429 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RPL13AP40429 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RPL13AP40429 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RPL13AP40429 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.25□□□□□ -0.29
RPL13AP40429 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC13.25□□□□□ -0.29
RPL13AP40429 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC13.25□□□□□ -0.29
RPL13AP40429 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
RPL13AP40429 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RPL13AP40429 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
RPL13AP40429 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RPL13AP40429 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RPL13AP40429 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RPL13AP40429 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RPL13AP40429 EBPL-204ENST00000378272 766 ntTSL 3 BASIC13.25□□□□□ -0.29
RPL13AP40429 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC13.25□□□□□ -0.29
RPL13AP40429 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RPL13AP40429 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC13.25□□□□□ -0.29
RPL13AP40429 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RPL13AP40429 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RPL13AP40429 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC13.25□□□□□ -0.29
RPL13AP40429 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RPL13AP40429 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RPL13AP40429 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RPL13AP40429 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RPL13AP40429 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RPL13AP40429 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RPL13AP40429 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RPL13AP40429 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RPL13AP40429 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC13.25□□□□□ -0.29
RPL13AP40429 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RPL13AP40429 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
RPL13AP40429 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RPL13AP40429 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms