Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CDH16O75309 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CDH16O75309 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH16O75309 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH16O75309 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CDH16O75309 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH16O75309 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CDH16O75309 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH16O75309 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CDH16O75309 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH16O75309 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.43■□□□□ 0.7
CDH16O75309 AC008694.1-202ENST00000636953 945 ntBASIC19.43■□□□□ 0.7
CDH16O75309 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH16O75309 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH16O75309 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH16O75309 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH16O75309 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH16O75309 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CDH16O75309 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.43■□□□□ 0.7
CDH16O75309 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH16O75309 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.42■□□□□ 0.7
CDH16O75309 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
CDH16O75309 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDH16O75309 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH16O75309 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH16O75309 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH16O75309 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDH16O75309 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CDH16O75309 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDH16O75309 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH16O75309 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CDH16O75309 CYP2T1P-201ENST00000432607 1285 ntBASIC19.42■□□□□ 0.7
CDH16O75309 DUX4L16-201ENST00000555130 1264 ntBASIC19.42■□□□□ 0.7
CDH16O75309 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.42■□□□□ 0.7
CDH16O75309 AC022517.1-201ENST00000592429 346 ntBASIC19.42■□□□□ 0.7
CDH16O75309 AC092666.2-201ENST00000613287 246 ntBASIC19.42■□□□□ 0.7
CDH16O75309 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH16O75309 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.42■□□□□ 0.7
CDH16O75309 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH16O75309 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH16O75309 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH16O75309 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CDH16O75309 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.42■□□□□ 0.7
CDH16O75309 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH16O75309 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.42■□□□□ 0.7
CDH16O75309 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH16O75309 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH16O75309 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH16O75309 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH16O75309 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH16O75309 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH16O75309 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.41■□□□□ 0.7
CDH16O75309 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CDH16O75309 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH16O75309 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CDH16O75309 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.41■□□□□ 0.7
CDH16O75309 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH16O75309 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH16O75309 PCDHB18P-201ENST00000524813 2368 ntBASIC19.41■□□□□ 0.7
CDH16O75309 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CDH16O75309 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH16O75309 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH16O75309 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH16O75309 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH16O75309 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.41■□□□□ 0.7
CDH16O75309 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CDH16O75309 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CDH16O75309 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH16O75309 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH16O75309 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.4■□□□□ 0.7
CDH16O75309 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CDH16O75309 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH16O75309 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDH16O75309 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH16O75309 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH16O75309 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH16O75309 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH16O75309 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH16O75309 AC016769.1-201ENST00000409132 1010 ntBASIC19.4■□□□□ 0.7
CDH16O75309 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.4■□□□□ 0.7
CDH16O75309 AC137761.2-201ENST00000561729 223 ntBASIC19.4■□□□□ 0.7
CDH16O75309 AC145350.3-201ENST00000569033 163 ntBASIC19.4■□□□□ 0.7
CDH16O75309 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CDH16O75309 AL137784.2-201ENST00000607332 1000 ntBASIC19.4■□□□□ 0.7
CDH16O75309 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.4■□□□□ 0.7
CDH16O75309 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CDH16O75309 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.4■□□□□ 0.7
CDH16O75309 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDH16O75309 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.4■□□□□ 0.7
CDH16O75309 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
CDH16O75309 AC010980.2-201ENST00000587099 1412 ntBASIC19.4■□□□□ 0.7
CDH16O75309 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH16O75309 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDH16O75309 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDH16O75309 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDH16O75309 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH16O75309 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.4■□□□□ 0.7
CDH16O75309 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDH16O75309 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDH16O75309 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms