Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPK1AO00322 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPK1AO00322 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPK1AO00322 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPK1AO00322 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.25■□□□□ 0.51
UPK1AO00322 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPK1AO00322 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPK1AO00322 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPK1AO00322 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
UPK1AO00322 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.24■□□□□ 0.51
UPK1AO00322 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.24■□□□□ 0.51
UPK1AO00322 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UPK1AO00322 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPK1AO00322 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.24■□□□□ 0.51
UPK1AO00322 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UPK1AO00322 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPK1AO00322 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UPK1AO00322 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.24■□□□□ 0.51
UPK1AO00322 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.24■□□□□ 0.51
UPK1AO00322 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.24■□□□□ 0.51
UPK1AO00322 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.24■□□□□ 0.51
UPK1AO00322 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UPK1AO00322 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPK1AO00322 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPK1AO00322 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
UPK1AO00322 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.24■□□□□ 0.51
UPK1AO00322 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UPK1AO00322 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.24■□□□□ 0.51
UPK1AO00322 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPK1AO00322 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.24■□□□□ 0.51
UPK1AO00322 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.24■□□□□ 0.51
UPK1AO00322 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPK1AO00322 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPK1AO00322 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
UPK1AO00322 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UPK1AO00322 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPK1AO00322 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPK1AO00322 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPK1AO00322 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
UPK1AO00322 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.23■□□□□ 0.51
UPK1AO00322 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.23■□□□□ 0.51
UPK1AO00322 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPK1AO00322 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPK1AO00322 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPK1AO00322 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
UPK1AO00322 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UPK1AO00322 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.23■□□□□ 0.51
UPK1AO00322 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UPK1AO00322 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.23■□□□□ 0.51
UPK1AO00322 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.23■□□□□ 0.51
UPK1AO00322 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.23■□□□□ 0.51
UPK1AO00322 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPK1AO00322 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.23■□□□□ 0.51
UPK1AO00322 AC135050.7-201ENST00000624508 2218 ntBASIC18.23■□□□□ 0.51
UPK1AO00322 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
UPK1AO00322 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPK1AO00322 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPK1AO00322 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
UPK1AO00322 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
UPK1AO00322 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UPK1AO00322 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPK1AO00322 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPK1AO00322 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.22■□□□□ 0.51
UPK1AO00322 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.22■□□□□ 0.51
UPK1AO00322 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.22■□□□□ 0.51
UPK1AO00322 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
UPK1AO00322 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPK1AO00322 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.22■□□□□ 0.51
UPK1AO00322 ESRRAP1-201ENST00000400596 1257 ntBASIC18.22■□□□□ 0.51
UPK1AO00322 KRT17P3-201ENST00000420566 1262 ntBASIC18.22■□□□□ 0.51
UPK1AO00322 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UPK1AO00322 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.22■□□□□ 0.51
UPK1AO00322 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.22■□□□□ 0.51
UPK1AO00322 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UPK1AO00322 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPK1AO00322 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.22■□□□□ 0.51
UPK1AO00322 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.22■□□□□ 0.51
UPK1AO00322 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPK1AO00322 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPK1AO00322 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UPK1AO00322 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.22■□□□□ 0.51
UPK1AO00322 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
UPK1AO00322 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPK1AO00322 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPK1AO00322 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.22■□□□□ 0.51
UPK1AO00322 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
UPK1AO00322 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
UPK1AO00322 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UPK1AO00322 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPK1AO00322 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UPK1AO00322 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.21■□□□□ 0.51
UPK1AO00322 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPK1AO00322 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPK1AO00322 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPK1AO00322 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPK1AO00322 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPK1AO00322 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPK1AO00322 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
UPK1AO00322 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.21■□□□□ 0.51
UPK1AO00322 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms