Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHISA3A0PJX4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.78■□□□□ 0.28
SHISA3A0PJX4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SHISA3A0PJX4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.78■□□□□ 0.28
SHISA3A0PJX4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHISA3A0PJX4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHISA3A0PJX4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.78■□□□□ 0.28
SHISA3A0PJX4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SHISA3A0PJX4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHISA3A0PJX4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.78■□□□□ 0.28
SHISA3A0PJX4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SHISA3A0PJX4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SHISA3A0PJX4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SHISA3A0PJX4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SHISA3A0PJX4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.77■□□□□ 0.28
SHISA3A0PJX4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SHISA3A0PJX4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.77■□□□□ 0.28
SHISA3A0PJX4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SHISA3A0PJX4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SHISA3A0PJX4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SHISA3A0PJX4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SHISA3A0PJX4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SHISA3A0PJX4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
SHISA3A0PJX4 AC008764.6-201ENST00000595909 2069 ntBASIC16.77■□□□□ 0.27
SHISA3A0PJX4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
SHISA3A0PJX4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SHISA3A0PJX4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.77■□□□□ 0.27
SHISA3A0PJX4 AC012313.1-201ENST00000593393 3059 ntBASIC16.77■□□□□ 0.27
SHISA3A0PJX4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.77■□□□□ 0.27
SHISA3A0PJX4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SHISA3A0PJX4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SHISA3A0PJX4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SHISA3A0PJX4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SHISA3A0PJX4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SHISA3A0PJX4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.76■□□□□ 0.27
SHISA3A0PJX4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
SHISA3A0PJX4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SHISA3A0PJX4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHISA3A0PJX4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.76■□□□□ 0.27
SHISA3A0PJX4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SHISA3A0PJX4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHISA3A0PJX4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHISA3A0PJX4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SHISA3A0PJX4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SHISA3A0PJX4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SHISA3A0PJX4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
SHISA3A0PJX4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.76■□□□□ 0.27
SHISA3A0PJX4 AC068338.2-201ENST00000563278 1430 ntBASIC16.76■□□□□ 0.27
SHISA3A0PJX4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHISA3A0PJX4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
SHISA3A0PJX4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SHISA3A0PJX4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
SHISA3A0PJX4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SHISA3A0PJX4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SHISA3A0PJX4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHISA3A0PJX4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHISA3A0PJX4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.75■□□□□ 0.27
SHISA3A0PJX4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SHISA3A0PJX4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHISA3A0PJX4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHISA3A0PJX4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHISA3A0PJX4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHISA3A0PJX4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SHISA3A0PJX4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHISA3A0PJX4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SHISA3A0PJX4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHISA3A0PJX4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHISA3A0PJX4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.75■□□□□ 0.27
SHISA3A0PJX4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHISA3A0PJX4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.75■□□□□ 0.27
SHISA3A0PJX4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHISA3A0PJX4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.75■□□□□ 0.27
SHISA3A0PJX4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SHISA3A0PJX4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHISA3A0PJX4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SHISA3A0PJX4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHISA3A0PJX4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SHISA3A0PJX4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.75■□□□□ 0.27
SHISA3A0PJX4 AC126763.1-201ENST00000552015 2118 ntBASIC16.75■□□□□ 0.27
SHISA3A0PJX4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHISA3A0PJX4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHISA3A0PJX4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SHISA3A0PJX4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHISA3A0PJX4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHISA3A0PJX4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SHISA3A0PJX4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SHISA3A0PJX4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.74■□□□□ 0.27
SHISA3A0PJX4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.74■□□□□ 0.27
SHISA3A0PJX4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHISA3A0PJX4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
SHISA3A0PJX4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SHISA3A0PJX4 CNN2P6-201ENST00000439038 900 ntBASIC16.74■□□□□ 0.27
SHISA3A0PJX4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHISA3A0PJX4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SHISA3A0PJX4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHISA3A0PJX4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHISA3A0PJX4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.74■□□□□ 0.27
SHISA3A0PJX4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.74■□□□□ 0.27
SHISA3A0PJX4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SHISA3A0PJX4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms