Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.18■□□□□ 0.5
NEUROD4Q9HD90 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NEUROD4Q9HD90 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEUROD4Q9HD90 HCG11-201ENST00000411553 5696 ntBASIC18.18■□□□□ 0.5
NEUROD4Q9HD90 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEUROD4Q9HD90 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.18■□□□□ 0.5
NEUROD4Q9HD90 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NEUROD4Q9HD90 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NEUROD4Q9HD90 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NEUROD4Q9HD90 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 PRORSD1P-201ENST00000295112 541 ntBASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 AL161938.1-201ENST00000569833 2180 ntBASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
NEUROD4Q9HD90 SDHAP1-207ENST00000440850 2000 ntBASIC18.16■□□□□ 0.5
NEUROD4Q9HD90 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NEUROD4Q9HD90 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
NEUROD4Q9HD90 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NEUROD4Q9HD90 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEUROD4Q9HD90 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.16■□□□□ 0.5
NEUROD4Q9HD90 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.16■□□□□ 0.5
NEUROD4Q9HD90 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEUROD4Q9HD90 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEUROD4Q9HD90 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
NEUROD4Q9HD90 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEUROD4Q9HD90 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NEUROD4Q9HD90 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
NEUROD4Q9HD90 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.16■□□□□ 0.5
NEUROD4Q9HD90 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NEUROD4Q9HD90 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
NEUROD4Q9HD90 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.16■□□□□ 0.5
NEUROD4Q9HD90 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
NEUROD4Q9HD90 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
NEUROD4Q9HD90 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEUROD4Q9HD90 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
NEUROD4Q9HD90 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NEUROD4Q9HD90 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
NEUROD4Q9HD90 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEUROD4Q9HD90 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEUROD4Q9HD90 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NEUROD4Q9HD90 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEUROD4Q9HD90 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NEUROD4Q9HD90 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEUROD4Q9HD90 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEUROD4Q9HD90 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEUROD4Q9HD90 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEUROD4Q9HD90 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEUROD4Q9HD90 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEUROD4Q9HD90 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
NEUROD4Q9HD90 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEUROD4Q9HD90 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NEUROD4Q9HD90 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEUROD4Q9HD90 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEUROD4Q9HD90 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.15■□□□□ 0.5
NEUROD4Q9HD90 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEUROD4Q9HD90 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEUROD4Q9HD90 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEUROD4Q9HD90 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEUROD4Q9HD90 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NEUROD4Q9HD90 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.15■□□□□ 0.5
NEUROD4Q9HD90 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.15■□□□□ 0.5
NEUROD4Q9HD90 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEUROD4Q9HD90 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEUROD4Q9HD90 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.15■□□□□ 0.5
NEUROD4Q9HD90 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NEUROD4Q9HD90 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.15■□□□□ 0.5
NEUROD4Q9HD90 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEUROD4Q9HD90 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEUROD4Q9HD90 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NEUROD4Q9HD90 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
NEUROD4Q9HD90 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.14■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms