Protein–RNA interactions for Protein: Q9HB31

SEBOX, Homeobox protein SEBOX, humanhuman

Predicted RBP Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEBOXQ9HB31 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SEBOXQ9HB31 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
SEBOXQ9HB31 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SEBOXQ9HB31 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SEBOXQ9HB31 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SEBOXQ9HB31 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SEBOXQ9HB31 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SEBOXQ9HB31 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SEBOXQ9HB31 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.34■□□□□ 0.21
SEBOXQ9HB31 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.34■□□□□ 0.21
SEBOXQ9HB31 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.34■□□□□ 0.21
SEBOXQ9HB31 AC026366.1-201ENST00000488803 879 ntBASIC16.34■□□□□ 0.21
SEBOXQ9HB31 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.34■□□□□ 0.21
SEBOXQ9HB31 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
SEBOXQ9HB31 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
SEBOXQ9HB31 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SEBOXQ9HB31 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SEBOXQ9HB31 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.34■□□□□ 0.21
SEBOXQ9HB31 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
SEBOXQ9HB31 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.34■□□□□ 0.21
SEBOXQ9HB31 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SEBOXQ9HB31 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SEBOXQ9HB31 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SEBOXQ9HB31 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.34■□□□□ 0.21
SEBOXQ9HB31 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.34■□□□□ 0.21
SEBOXQ9HB31 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.33■□□□□ 0.21
SEBOXQ9HB31 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
SEBOXQ9HB31 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.33■□□□□ 0.21
SEBOXQ9HB31 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SEBOXQ9HB31 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SEBOXQ9HB31 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SEBOXQ9HB31 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SEBOXQ9HB31 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
SEBOXQ9HB31 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SEBOXQ9HB31 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SEBOXQ9HB31 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SEBOXQ9HB31 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SEBOXQ9HB31 KRT17P3-201ENST00000420566 1262 ntBASIC16.33■□□□□ 0.2
SEBOXQ9HB31 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.33■□□□□ 0.2
SEBOXQ9HB31 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.33■□□□□ 0.2
SEBOXQ9HB31 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.33■□□□□ 0.2
SEBOXQ9HB31 AP003097.1-201ENST00000530657 1135 ntBASIC16.33■□□□□ 0.2
SEBOXQ9HB31 PRKY-204ENST00000533551 1019 ntBASIC16.33■□□□□ 0.2
SEBOXQ9HB31 KRT18P6-201ENST00000555540 1265 ntBASIC16.33■□□□□ 0.2
SEBOXQ9HB31 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.33■□□□□ 0.2
SEBOXQ9HB31 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SEBOXQ9HB31 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SEBOXQ9HB31 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SEBOXQ9HB31 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SEBOXQ9HB31 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SEBOXQ9HB31 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SEBOXQ9HB31 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SEBOXQ9HB31 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.33■□□□□ 0.2
SEBOXQ9HB31 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.33■□□□□ 0.2
SEBOXQ9HB31 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SEBOXQ9HB31 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SEBOXQ9HB31 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SEBOXQ9HB31 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.33■□□□□ 0.2
SEBOXQ9HB31 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.33■□□□□ 0.2
SEBOXQ9HB31 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SEBOXQ9HB31 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SEBOXQ9HB31 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
SEBOXQ9HB31 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEBOXQ9HB31 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEBOXQ9HB31 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEBOXQ9HB31 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SEBOXQ9HB31 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SEBOXQ9HB31 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEBOXQ9HB31 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.32■□□□□ 0.2
SEBOXQ9HB31 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEBOXQ9HB31 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEBOXQ9HB31 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SEBOXQ9HB31 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SEBOXQ9HB31 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.32■□□□□ 0.2
SEBOXQ9HB31 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEBOXQ9HB31 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SEBOXQ9HB31 TUBB8P6-201ENST00000436895 1288 ntBASIC16.32■□□□□ 0.2
SEBOXQ9HB31 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.32■□□□□ 0.2
SEBOXQ9HB31 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.32■□□□□ 0.2
SEBOXQ9HB31 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
SEBOXQ9HB31 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SEBOXQ9HB31 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.32■□□□□ 0.2
SEBOXQ9HB31 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.32■□□□□ 0.2
SEBOXQ9HB31 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.32■□□□□ 0.2
SEBOXQ9HB31 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEBOXQ9HB31 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEBOXQ9HB31 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SEBOXQ9HB31 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SEBOXQ9HB31 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEBOXQ9HB31 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.31■□□□□ 0.2
SEBOXQ9HB31 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEBOXQ9HB31 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.31■□□□□ 0.2
SEBOXQ9HB31 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.31■□□□□ 0.2
SEBOXQ9HB31 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEBOXQ9HB31 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SEBOXQ9HB31 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SEBOXQ9HB31 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEBOXQ9HB31 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEBOXQ9HB31 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SEBOXQ9HB31 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms