Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
RETREG2Q8NC44 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
RETREG2Q8NC44 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.81■■□□□ 1.08
RETREG2Q8NC44 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.81■■□□□ 1.08
RETREG2Q8NC44 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RETREG2Q8NC44 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
RETREG2Q8NC44 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
RETREG2Q8NC44 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RETREG2Q8NC44 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
RETREG2Q8NC44 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.81■■□□□ 1.08
RETREG2Q8NC44 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RETREG2Q8NC44 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RETREG2Q8NC44 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
RETREG2Q8NC44 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.8■■□□□ 1.08
RETREG2Q8NC44 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.8■■□□□ 1.08
RETREG2Q8NC44 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RETREG2Q8NC44 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RETREG2Q8NC44 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.8■■□□□ 1.08
RETREG2Q8NC44 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.8■■□□□ 1.08
RETREG2Q8NC44 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RETREG2Q8NC44 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RETREG2Q8NC44 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RETREG2Q8NC44 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.8■■□□□ 1.08
RETREG2Q8NC44 TUBB8P6-201ENST00000436895 1288 ntBASIC21.8■■□□□ 1.08
RETREG2Q8NC44 AC087388.1-201ENST00000571370 1112 ntBASIC21.8■■□□□ 1.08
RETREG2Q8NC44 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.8■■□□□ 1.08
RETREG2Q8NC44 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RETREG2Q8NC44 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RETREG2Q8NC44 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.8■■□□□ 1.08
RETREG2Q8NC44 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RETREG2Q8NC44 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RETREG2Q8NC44 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.79■■□□□ 1.08
RETREG2Q8NC44 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.79■■□□□ 1.08
RETREG2Q8NC44 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RETREG2Q8NC44 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RETREG2Q8NC44 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
RETREG2Q8NC44 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
RETREG2Q8NC44 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
RETREG2Q8NC44 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.79■■□□□ 1.08
RETREG2Q8NC44 KRT18P16-201ENST00000510337 1294 ntBASIC21.79■■□□□ 1.08
RETREG2Q8NC44 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.79■■□□□ 1.08
RETREG2Q8NC44 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.79■■□□□ 1.08
RETREG2Q8NC44 C1QL1P1-201ENST00000568105 661 ntBASIC21.79■■□□□ 1.08
RETREG2Q8NC44 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RETREG2Q8NC44 AL445675.2-201ENST00000620291 557 ntBASIC21.79■■□□□ 1.08
RETREG2Q8NC44 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RETREG2Q8NC44 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RETREG2Q8NC44 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.79■■□□□ 1.08
RETREG2Q8NC44 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.79■■□□□ 1.08
RETREG2Q8NC44 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RETREG2Q8NC44 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.78■■□□□ 1.08
RETREG2Q8NC44 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RETREG2Q8NC44 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RETREG2Q8NC44 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RETREG2Q8NC44 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.78■■□□□ 1.08
RETREG2Q8NC44 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RETREG2Q8NC44 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.78■■□□□ 1.08
RETREG2Q8NC44 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RETREG2Q8NC44 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RETREG2Q8NC44 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RETREG2Q8NC44 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RETREG2Q8NC44 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.78■■□□□ 1.08
RETREG2Q8NC44 AC026271.3-201ENST00000571884 352 ntBASIC21.78■■□□□ 1.08
RETREG2Q8NC44 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.78■■□□□ 1.08
RETREG2Q8NC44 AC018445.3-201ENST00000624177 1945 ntBASIC21.78■■□□□ 1.08
RETREG2Q8NC44 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RETREG2Q8NC44 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RETREG2Q8NC44 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
RETREG2Q8NC44 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RETREG2Q8NC44 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RETREG2Q8NC44 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RETREG2Q8NC44 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
RETREG2Q8NC44 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
RETREG2Q8NC44 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.77■■□□□ 1.08
RETREG2Q8NC44 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RETREG2Q8NC44 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.77■■□□□ 1.08
RETREG2Q8NC44 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.77■■□□□ 1.08
RETREG2Q8NC44 EGLN1P1-201ENST00000531623 762 ntBASIC21.77■■□□□ 1.08
RETREG2Q8NC44 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.77■■□□□ 1.08
RETREG2Q8NC44 AC010203.1-204ENST00000548782 407 ntBASIC21.77■■□□□ 1.08
RETREG2Q8NC44 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
RETREG2Q8NC44 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
RETREG2Q8NC44 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.77■■□□□ 1.08
RETREG2Q8NC44 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.77■■□□□ 1.08
RETREG2Q8NC44 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RETREG2Q8NC44 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RETREG2Q8NC44 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RETREG2Q8NC44 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.77■■□□□ 1.07
RETREG2Q8NC44 TREX1-205ENST00000625293 1783 ntBASIC21.76■■□□□ 1.07
RETREG2Q8NC44 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RETREG2Q8NC44 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RETREG2Q8NC44 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RETREG2Q8NC44 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
RETREG2Q8NC44 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RETREG2Q8NC44 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
RETREG2Q8NC44 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RETREG2Q8NC44 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RETREG2Q8NC44 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.76■■□□□ 1.07
RETREG2Q8NC44 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
RETREG2Q8NC44 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms