Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
XRN1Q8IZH2 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
XRN1Q8IZH2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC26.82■■□□□ 1.88
XRN1Q8IZH2 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
XRN1Q8IZH2 AL022342.1-201ENST00000400363 863 ntBASIC26.82■■□□□ 1.88
XRN1Q8IZH2 EMBP1-201ENST00000458200 901 ntBASIC26.82■■□□□ 1.88
XRN1Q8IZH2 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC26.82■■□□□ 1.88
XRN1Q8IZH2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC26.82■■□□□ 1.88
XRN1Q8IZH2 CIB2-208ENST00000560618 804 ntTSL 2 BASIC26.82■■□□□ 1.88
XRN1Q8IZH2 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC26.82■■□□□ 1.88
XRN1Q8IZH2 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
XRN1Q8IZH2 AL671883.3-201ENST00000603274 991 ntBASIC26.82■■□□□ 1.88
XRN1Q8IZH2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
XRN1Q8IZH2 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
XRN1Q8IZH2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
XRN1Q8IZH2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC26.81■■□□□ 1.88
XRN1Q8IZH2 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
XRN1Q8IZH2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC26.81■■□□□ 1.88
XRN1Q8IZH2 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
XRN1Q8IZH2 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC26.81■■□□□ 1.88
XRN1Q8IZH2 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC26.81■■□□□ 1.88
XRN1Q8IZH2 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
XRN1Q8IZH2 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC26.81■■□□□ 1.88
XRN1Q8IZH2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC26.81■■□□□ 1.88
XRN1Q8IZH2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
XRN1Q8IZH2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
XRN1Q8IZH2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
XRN1Q8IZH2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
XRN1Q8IZH2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC26.8■■□□□ 1.88
XRN1Q8IZH2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
XRN1Q8IZH2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
XRN1Q8IZH2 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC26.8■■□□□ 1.88
XRN1Q8IZH2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
XRN1Q8IZH2 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
XRN1Q8IZH2 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC26.8■■□□□ 1.88
XRN1Q8IZH2 KRT8P26-201ENST00000534154 1276 ntBASIC26.8■■□□□ 1.88
XRN1Q8IZH2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC26.8■■□□□ 1.88
XRN1Q8IZH2 AC011498.5-201ENST00000592027 486 ntBASIC26.8■■□□□ 1.88
XRN1Q8IZH2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC26.8■■□□□ 1.88
XRN1Q8IZH2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC26.8■■□□□ 1.88
XRN1Q8IZH2 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC26.8■■□□□ 1.88
XRN1Q8IZH2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC26.8■■□□□ 1.88
XRN1Q8IZH2 AC009237.14-201ENST00000609975 1594 ntBASIC26.8■■□□□ 1.88
XRN1Q8IZH2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC26.8■■□□□ 1.88
XRN1Q8IZH2 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC26.8■■□□□ 1.88
XRN1Q8IZH2 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC26.8■■□□□ 1.88
XRN1Q8IZH2 ANKRD18DP-204ENST00000455355 1975 ntBASIC26.8■■□□□ 1.88
XRN1Q8IZH2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
XRN1Q8IZH2 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
XRN1Q8IZH2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC26.79■■□□□ 1.88
XRN1Q8IZH2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
XRN1Q8IZH2 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC26.79■■□□□ 1.88
XRN1Q8IZH2 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC26.79■■□□□ 1.88
XRN1Q8IZH2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC26.79■■□□□ 1.88
XRN1Q8IZH2 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
XRN1Q8IZH2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
XRN1Q8IZH2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
XRN1Q8IZH2 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
XRN1Q8IZH2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC26.79■■□□□ 1.88
XRN1Q8IZH2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
XRN1Q8IZH2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
XRN1Q8IZH2 TSPY19P-201ENST00000418461 509 ntBASIC26.79■■□□□ 1.88
XRN1Q8IZH2 TSPY18P-201ENST00000441642 509 ntBASIC26.79■■□□□ 1.88
XRN1Q8IZH2 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC26.79■■□□□ 1.88
XRN1Q8IZH2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC26.79■■□□□ 1.88
XRN1Q8IZH2 AC012615.1-201ENST00000565797 1299 ntBASIC26.79■■□□□ 1.88
XRN1Q8IZH2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
XRN1Q8IZH2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
XRN1Q8IZH2 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC26.79■■□□□ 1.88
XRN1Q8IZH2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC26.79■■□□□ 1.88
XRN1Q8IZH2 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC26.78■■□□□ 1.88
XRN1Q8IZH2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
XRN1Q8IZH2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
XRN1Q8IZH2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC26.78■■□□□ 1.88
XRN1Q8IZH2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
XRN1Q8IZH2 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
XRN1Q8IZH2 DRAXINP1-201ENST00000437611 948 ntBASIC26.78■■□□□ 1.88
XRN1Q8IZH2 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC26.78■■□□□ 1.88
XRN1Q8IZH2 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC26.78■■□□□ 1.88
XRN1Q8IZH2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC26.78■■□□□ 1.88
XRN1Q8IZH2 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC26.78■■□□□ 1.88
XRN1Q8IZH2 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
XRN1Q8IZH2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
XRN1Q8IZH2 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
XRN1Q8IZH2 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC26.78■■□□□ 1.88
XRN1Q8IZH2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
XRN1Q8IZH2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
XRN1Q8IZH2 AC026310.3-201ENST00000625186 2373 ntBASIC26.78■■□□□ 1.88
XRN1Q8IZH2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
XRN1Q8IZH2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
XRN1Q8IZH2 AP005212.1-201ENST00000581547 1997 ntBASIC26.77■■□□□ 1.88
XRN1Q8IZH2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
XRN1Q8IZH2 MPI-205ENST00000562606 1052 ntTSL 3 BASIC26.77■■□□□ 1.88
XRN1Q8IZH2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC26.77■■□□□ 1.88
XRN1Q8IZH2 SPEG-225ENST00000617028 815 ntTSL 5 BASIC26.77■■□□□ 1.88
XRN1Q8IZH2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
XRN1Q8IZH2 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
XRN1Q8IZH2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
XRN1Q8IZH2 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
XRN1Q8IZH2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms