Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
TRIM42Q8IWZ5 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TRIM42Q8IWZ5 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TRIM42Q8IWZ5 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM42Q8IWZ5 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 AC104581.1-202ENST00000635932 2618 ntBASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 AC006015.1-201ENST00000429970 570 ntBASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 RARRES2P4-201ENST00000514074 484 ntBASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 WIZP1-201ENST00000531444 2299 ntBASIC19.2■□□□□ 0.66
TRIM42Q8IWZ5 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TRIM42Q8IWZ5 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM42Q8IWZ5 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM42Q8IWZ5 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.19■□□□□ 0.66
TRIM42Q8IWZ5 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM42Q8IWZ5 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM42Q8IWZ5 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM42Q8IWZ5 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM42Q8IWZ5 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TRIM42Q8IWZ5 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM42Q8IWZ5 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM42Q8IWZ5 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM42Q8IWZ5 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.19■□□□□ 0.66
TRIM42Q8IWZ5 AC018553.1-201ENST00000616682 1458 ntBASIC19.19■□□□□ 0.66
TRIM42Q8IWZ5 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.19■□□□□ 0.66
TRIM42Q8IWZ5 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM42Q8IWZ5 ZNF815P-204ENST00000434898 1737 ntBASIC19.19■□□□□ 0.66
TRIM42Q8IWZ5 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM42Q8IWZ5 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM42Q8IWZ5 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.19■□□□□ 0.66
TRIM42Q8IWZ5 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM42Q8IWZ5 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM42Q8IWZ5 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM42Q8IWZ5 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM42Q8IWZ5 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM42Q8IWZ5 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM42Q8IWZ5 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM42Q8IWZ5 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM42Q8IWZ5 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.18■□□□□ 0.66
TRIM42Q8IWZ5 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM42Q8IWZ5 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM42Q8IWZ5 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM42Q8IWZ5 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
TRIM42Q8IWZ5 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.18■□□□□ 0.66
TRIM42Q8IWZ5 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM42Q8IWZ5 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.18■□□□□ 0.66
TRIM42Q8IWZ5 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM42Q8IWZ5 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM42Q8IWZ5 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.18■□□□□ 0.66
TRIM42Q8IWZ5 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM42Q8IWZ5 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.18■□□□□ 0.66
TRIM42Q8IWZ5 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM42Q8IWZ5 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TRIM42Q8IWZ5 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TRIM42Q8IWZ5 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM42Q8IWZ5 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM42Q8IWZ5 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM42Q8IWZ5 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM42Q8IWZ5 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM42Q8IWZ5 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM42Q8IWZ5 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM42Q8IWZ5 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM42Q8IWZ5 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TRIM42Q8IWZ5 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM42Q8IWZ5 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM42Q8IWZ5 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM42Q8IWZ5 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM42Q8IWZ5 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM42Q8IWZ5 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM42Q8IWZ5 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM42Q8IWZ5 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.17■□□□□ 0.66
TRIM42Q8IWZ5 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms