Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
LDB1Q86U70 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.23■□□□□ 0.67
LDB1Q86U70 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
LDB1Q86U70 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LDB1Q86U70 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
LDB1Q86U70 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.23■□□□□ 0.67
LDB1Q86U70 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LDB1Q86U70 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
LDB1Q86U70 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LDB1Q86U70 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LDB1Q86U70 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
LDB1Q86U70 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
LDB1Q86U70 AL161938.1-201ENST00000569833 2180 ntBASIC19.23■□□□□ 0.67
LDB1Q86U70 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
LDB1Q86U70 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
LDB1Q86U70 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LDB1Q86U70 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
LDB1Q86U70 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
LDB1Q86U70 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
LDB1Q86U70 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LDB1Q86U70 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
LDB1Q86U70 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDB1Q86U70 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDB1Q86U70 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDB1Q86U70 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDB1Q86U70 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.22■□□□□ 0.67
LDB1Q86U70 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.22■□□□□ 0.67
LDB1Q86U70 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDB1Q86U70 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDB1Q86U70 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
LDB1Q86U70 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDB1Q86U70 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.22■□□□□ 0.67
LDB1Q86U70 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LDB1Q86U70 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LDB1Q86U70 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDB1Q86U70 C1QBPP2-201ENST00000528754 825 ntBASIC19.22■□□□□ 0.67
LDB1Q86U70 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LDB1Q86U70 AC004264.1-201ENST00000608354 794 ntBASIC19.22■□□□□ 0.67
LDB1Q86U70 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.22■□□□□ 0.67
LDB1Q86U70 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDB1Q86U70 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.22■□□□□ 0.67
LDB1Q86U70 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.22■□□□□ 0.67
LDB1Q86U70 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.22■□□□□ 0.67
LDB1Q86U70 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDB1Q86U70 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDB1Q86U70 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.22■□□□□ 0.67
LDB1Q86U70 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDB1Q86U70 AC004408.2-201ENST00000623613 2777 ntBASIC19.21■□□□□ 0.67
LDB1Q86U70 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.21■□□□□ 0.67
LDB1Q86U70 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LDB1Q86U70 AC141586.3-201ENST00000562166 1838 ntBASIC19.21■□□□□ 0.67
LDB1Q86U70 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.21■□□□□ 0.67
LDB1Q86U70 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.21■□□□□ 0.67
LDB1Q86U70 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
LDB1Q86U70 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.21■□□□□ 0.67
LDB1Q86U70 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LDB1Q86U70 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.21■□□□□ 0.67
LDB1Q86U70 C1QL1P1-201ENST00000568105 661 ntBASIC19.21■□□□□ 0.67
LDB1Q86U70 HLA-A-209ENST00000638375 975 ntBASIC19.21■□□□□ 0.67
LDB1Q86U70 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LDB1Q86U70 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.21■□□□□ 0.67
LDB1Q86U70 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.21■□□□□ 0.67
LDB1Q86U70 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.21■□□□□ 0.67
LDB1Q86U70 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LDB1Q86U70 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LDB1Q86U70 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.2■□□□□ 0.66
LDB1Q86U70 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.2■□□□□ 0.66
LDB1Q86U70 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LDB1Q86U70 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LDB1Q86U70 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
LDB1Q86U70 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LDB1Q86U70 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
LDB1Q86U70 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.2■□□□□ 0.66
LDB1Q86U70 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LDB1Q86U70 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.2■□□□□ 0.66
LDB1Q86U70 FAM201B-201ENST00000458407 597 ntBASIC19.2■□□□□ 0.66
LDB1Q86U70 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
LDB1Q86U70 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.2■□□□□ 0.66
LDB1Q86U70 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.2■□□□□ 0.66
LDB1Q86U70 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.2■□□□□ 0.66
LDB1Q86U70 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LDB1Q86U70 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LDB1Q86U70 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LDB1Q86U70 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LDB1Q86U70 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
LDB1Q86U70 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LDB1Q86U70 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.2■□□□□ 0.66
LDB1Q86U70 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LDB1Q86U70 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
LDB1Q86U70 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
LDB1Q86U70 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
LDB1Q86U70 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LDB1Q86U70 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LDB1Q86U70 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LDB1Q86U70 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
LDB1Q86U70 BX323043.1-201ENST00000641006 1765 ntBASIC19.19■□□□□ 0.66
LDB1Q86U70 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.19■□□□□ 0.66
LDB1Q86U70 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.19■□□□□ 0.66
LDB1Q86U70 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LDB1Q86U70 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms