Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H3AQ71DI3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H3AQ71DI3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H3AQ71DI3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.92■□□□□ 0.3
HIST2H3AQ71DI3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
HIST2H3AQ71DI3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H3AQ71DI3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.92■□□□□ 0.3
HIST2H3AQ71DI3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H3AQ71DI3 SDHAP1-207ENST00000440850 2000 ntBASIC16.92■□□□□ 0.3
HIST2H3AQ71DI3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.92■□□□□ 0.3
HIST2H3AQ71DI3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H3AQ71DI3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H3AQ71DI3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H3AQ71DI3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H3AQ71DI3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST2H3AQ71DI3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HIST2H3AQ71DI3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.91■□□□□ 0.3
HIST2H3AQ71DI3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.91■□□□□ 0.3
HIST2H3AQ71DI3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.91■□□□□ 0.3
HIST2H3AQ71DI3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H3AQ71DI3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.91■□□□□ 0.3
HIST2H3AQ71DI3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.91■□□□□ 0.3
HIST2H3AQ71DI3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H3AQ71DI3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H3AQ71DI3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H3AQ71DI3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H3AQ71DI3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H3AQ71DI3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.91■□□□□ 0.3
HIST2H3AQ71DI3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H3AQ71DI3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.91■□□□□ 0.3
HIST2H3AQ71DI3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.91■□□□□ 0.3
HIST2H3AQ71DI3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.91■□□□□ 0.3
HIST2H3AQ71DI3 C1QL1P1-201ENST00000568105 661 ntBASIC16.91■□□□□ 0.3
HIST2H3AQ71DI3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.91■□□□□ 0.3
HIST2H3AQ71DI3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.91■□□□□ 0.3
HIST2H3AQ71DI3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H3AQ71DI3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.91■□□□□ 0.3
HIST2H3AQ71DI3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H3AQ71DI3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.91■□□□□ 0.3
HIST2H3AQ71DI3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HIST2H3AQ71DI3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H3AQ71DI3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H3AQ71DI3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H3AQ71DI3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H3AQ71DI3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.91■□□□□ 0.3
HIST2H3AQ71DI3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H3AQ71DI3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.91■□□□□ 0.3
HIST2H3AQ71DI3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIST2H3AQ71DI3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST2H3AQ71DI3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST2H3AQ71DI3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST2H3AQ71DI3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST2H3AQ71DI3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.9■□□□□ 0.3
HIST2H3AQ71DI3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST2H3AQ71DI3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.9■□□□□ 0.3
HIST2H3AQ71DI3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HIST2H3AQ71DI3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST2H3AQ71DI3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HIST2H3AQ71DI3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST2H3AQ71DI3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.9■□□□□ 0.3
HIST2H3AQ71DI3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HIST2H3AQ71DI3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.9■□□□□ 0.3
HIST2H3AQ71DI3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.9■□□□□ 0.3
HIST2H3AQ71DI3 AC004264.1-201ENST00000608354 794 ntBASIC16.9■□□□□ 0.3
HIST2H3AQ71DI3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.9■□□□□ 0.3
HIST2H3AQ71DI3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST2H3AQ71DI3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
HIST2H3AQ71DI3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.9■□□□□ 0.3
HIST2H3AQ71DI3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.9■□□□□ 0.3
HIST2H3AQ71DI3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.9■□□□□ 0.3
HIST2H3AQ71DI3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST2H3AQ71DI3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HIST2H3AQ71DI3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HIST2H3AQ71DI3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HIST2H3AQ71DI3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
HIST2H3AQ71DI3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIST2H3AQ71DI3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
HIST2H3AQ71DI3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.89■□□□□ 0.29
HIST2H3AQ71DI3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
HIST2H3AQ71DI3 AC133681.1-201ENST00000465482 601 ntBASIC16.89■□□□□ 0.29
HIST2H3AQ71DI3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.89■□□□□ 0.29
HIST2H3AQ71DI3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.89■□□□□ 0.29
HIST2H3AQ71DI3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIST2H3AQ71DI3 RN7SL471P-201ENST00000580476 299 ntBASIC16.89■□□□□ 0.29
HIST2H3AQ71DI3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HIST2H3AQ71DI3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIST2H3AQ71DI3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HIST2H3AQ71DI3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HIST2H3AQ71DI3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HIST2H3AQ71DI3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIST2H3AQ71DI3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HIST2H3AQ71DI3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIST2H3AQ71DI3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST2H3AQ71DI3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST2H3AQ71DI3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.88■□□□□ 0.29
HIST2H3AQ71DI3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST2H3AQ71DI3 LINC01465-201ENST00000408887 1940 ntBASIC16.88■□□□□ 0.29
HIST2H3AQ71DI3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.88■□□□□ 0.29
HIST2H3AQ71DI3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST2H3AQ71DI3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms