Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GTF2A1P52655 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
GTF2A1P52655 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
GTF2A1P52655 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
GTF2A1P52655 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
GTF2A1P52655 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GTF2A1P52655 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GTF2A1P52655 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GTF2A1P52655 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.91■□□□□ 0.62
GTF2A1P52655 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GTF2A1P52655 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GTF2A1P52655 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.91■□□□□ 0.62
GTF2A1P52655 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.9■□□□□ 0.62
GTF2A1P52655 AC073592.3-201ENST00000625118 1834 ntBASIC18.9■□□□□ 0.62
GTF2A1P52655 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF2A1P52655 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.9■□□□□ 0.62
GTF2A1P52655 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF2A1P52655 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
GTF2A1P52655 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF2A1P52655 LINC00554-201ENST00000564841 3011 ntBASIC18.9■□□□□ 0.62
GTF2A1P52655 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF2A1P52655 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.9■□□□□ 0.62
GTF2A1P52655 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.9■□□□□ 0.62
GTF2A1P52655 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF2A1P52655 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GTF2A1P52655 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF2A1P52655 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF2A1P52655 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF2A1P52655 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF2A1P52655 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF2A1P52655 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GTF2A1P52655 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF2A1P52655 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.9■□□□□ 0.62
GTF2A1P52655 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF2A1P52655 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
GTF2A1P52655 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.9■□□□□ 0.62
GTF2A1P52655 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GTF2A1P52655 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.9■□□□□ 0.62
GTF2A1P52655 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.9■□□□□ 0.62
GTF2A1P52655 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF2A1P52655 AC012317.2-201ENST00000623305 2251 ntBASIC18.9■□□□□ 0.62
GTF2A1P52655 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.9■□□□□ 0.62
GTF2A1P52655 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.9■□□□□ 0.62
GTF2A1P52655 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF2A1P52655 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF2A1P52655 OR7E47P-201ENST00000546390 1422 ntBASIC18.9■□□□□ 0.62
GTF2A1P52655 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.9■□□□□ 0.62
GTF2A1P52655 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
GTF2A1P52655 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
GTF2A1P52655 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF2A1P52655 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
GTF2A1P52655 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.9■□□□□ 0.62
GTF2A1P52655 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
GTF2A1P52655 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
GTF2A1P52655 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
GTF2A1P52655 AL136379.1-201ENST00000623471 2642 ntBASIC18.89■□□□□ 0.62
GTF2A1P52655 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
GTF2A1P52655 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.89■□□□□ 0.62
GTF2A1P52655 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GTF2A1P52655 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GTF2A1P52655 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GTF2A1P52655 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
GTF2A1P52655 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.89■□□□□ 0.61
GTF2A1P52655 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
GTF2A1P52655 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
GTF2A1P52655 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GTF2A1P52655 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GTF2A1P52655 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GTF2A1P52655 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GTF2A1P52655 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
GTF2A1P52655 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
GTF2A1P52655 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
GTF2A1P52655 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
GTF2A1P52655 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.89■□□□□ 0.61
GTF2A1P52655 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GTF2A1P52655 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
GTF2A1P52655 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.89■□□□□ 0.61
GTF2A1P52655 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.89■□□□□ 0.61
GTF2A1P52655 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.89■□□□□ 0.61
GTF2A1P52655 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.89■□□□□ 0.61
GTF2A1P52655 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
GTF2A1P52655 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
GTF2A1P52655 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.89■□□□□ 0.61
GTF2A1P52655 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.88■□□□□ 0.61
GTF2A1P52655 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GTF2A1P52655 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
GTF2A1P52655 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.88■□□□□ 0.61
GTF2A1P52655 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
GTF2A1P52655 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.88■□□□□ 0.61
GTF2A1P52655 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.88■□□□□ 0.61
GTF2A1P52655 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
GTF2A1P52655 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GTF2A1P52655 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
GTF2A1P52655 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GTF2A1P52655 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.88■□□□□ 0.61
GTF2A1P52655 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.88■□□□□ 0.61
GTF2A1P52655 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
GTF2A1P52655 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.88■□□□□ 0.61
GTF2A1P52655 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.88■□□□□ 0.61
GTF2A1P52655 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms