Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
SNRNP200O75643 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
SNRNP200O75643 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP200O75643 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP200O75643 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.45■□□□□ 0.54
SNRNP200O75643 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP200O75643 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP200O75643 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP200O75643 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP200O75643 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.45■□□□□ 0.54
SNRNP200O75643 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP200O75643 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP200O75643 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP200O75643 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP200O75643 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP200O75643 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.45■□□□□ 0.54
SNRNP200O75643 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SNRNP200O75643 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP200O75643 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
SNRNP200O75643 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP200O75643 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.45■□□□□ 0.54
SNRNP200O75643 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP200O75643 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNRNP200O75643 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.44■□□□□ 0.54
SNRNP200O75643 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.44■□□□□ 0.54
SNRNP200O75643 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SNRNP200O75643 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SNRNP200O75643 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNRNP200O75643 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNRNP200O75643 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.44■□□□□ 0.54
SNRNP200O75643 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
SNRNP200O75643 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNRNP200O75643 KRT8P11-201ENST00000409686 1436 ntBASIC18.44■□□□□ 0.54
SNRNP200O75643 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.44■□□□□ 0.54
SNRNP200O75643 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SNRNP200O75643 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNRNP200O75643 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNRNP200O75643 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.44■□□□□ 0.54
SNRNP200O75643 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.44■□□□□ 0.54
SNRNP200O75643 AC010947.1-201ENST00000623454 693 ntBASIC18.44■□□□□ 0.54
SNRNP200O75643 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SNRNP200O75643 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.44■□□□□ 0.54
SNRNP200O75643 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SNRNP200O75643 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SNRNP200O75643 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SNRNP200O75643 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.43■□□□□ 0.54
SNRNP200O75643 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.43■□□□□ 0.54
SNRNP200O75643 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
SNRNP200O75643 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SNRNP200O75643 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.43■□□□□ 0.54
SNRNP200O75643 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.43■□□□□ 0.54
SNRNP200O75643 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.43■□□□□ 0.54
SNRNP200O75643 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.43■□□□□ 0.54
SNRNP200O75643 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SNRNP200O75643 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNRNP200O75643 AL032819.2-201ENST00000624543 2162 ntBASIC18.43■□□□□ 0.54
SNRNP200O75643 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNRNP200O75643 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.43■□□□□ 0.54
SNRNP200O75643 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.43■□□□□ 0.54
SNRNP200O75643 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
SNRNP200O75643 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.43■□□□□ 0.54
SNRNP200O75643 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNRNP200O75643 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNRNP200O75643 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.43■□□□□ 0.54
SNRNP200O75643 MFAP1P1-201ENST00000442257 1255 ntBASIC18.43■□□□□ 0.54
SNRNP200O75643 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SNRNP200O75643 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNRNP200O75643 AC133561.5-201ENST00000635547 218 ntBASIC18.43■□□□□ 0.54
SNRNP200O75643 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SNRNP200O75643 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.43■□□□□ 0.54
SNRNP200O75643 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.43■□□□□ 0.54
SNRNP200O75643 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNRNP200O75643 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNRNP200O75643 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.42■□□□□ 0.54
SNRNP200O75643 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNRNP200O75643 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SNRNP200O75643 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SNRNP200O75643 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNRNP200O75643 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNRNP200O75643 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.42■□□□□ 0.54
SNRNP200O75643 FITM1-202ENST00000559294 800 ntBASIC18.42■□□□□ 0.54
SNRNP200O75643 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.42■□□□□ 0.54
SNRNP200O75643 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.42■□□□□ 0.54
SNRNP200O75643 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SNRNP200O75643 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.42■□□□□ 0.54
SNRNP200O75643 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNRNP200O75643 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNRNP200O75643 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNRNP200O75643 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNRNP200O75643 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNRNP200O75643 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNRNP200O75643 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.41■□□□□ 0.54
SNRNP200O75643 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.41■□□□□ 0.54
SNRNP200O75643 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SNRNP200O75643 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SNRNP200O75643 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.41■□□□□ 0.54
SNRNP200O75643 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SNRNP200O75643 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.41■□□□□ 0.54
SNRNP200O75643 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNRNP200O75643 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms