Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMARCA5O60264 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMARCA5O60264 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC23.8■■□□□ 1.4
SMARCA5O60264 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMARCA5O60264 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
SMARCA5O60264 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMARCA5O60264 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
SMARCA5O60264 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA5O60264 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC23.79■■□□□ 1.4
SMARCA5O60264 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
SMARCA5O60264 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA5O60264 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA5O60264 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA5O60264 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA5O60264 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA5O60264 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA5O60264 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA5O60264 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC23.79■■□□□ 1.4
SMARCA5O60264 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA5O60264 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA5O60264 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA5O60264 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA5O60264 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA5O60264 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC23.79■■□□□ 1.4
SMARCA5O60264 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA5O60264 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA5O60264 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC23.79■■□□□ 1.4
SMARCA5O60264 AL160286.2-201ENST00000567150 934 ntBASIC23.79■■□□□ 1.4
SMARCA5O60264 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC23.79■■□□□ 1.4
SMARCA5O60264 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA5O60264 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA5O60264 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA5O60264 AL161938.1-201ENST00000569833 2180 ntBASIC23.79■■□□□ 1.4
SMARCA5O60264 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCA5O60264 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
SMARCA5O60264 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC23.79■■□□□ 1.4
SMARCA5O60264 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC23.79■■□□□ 1.4
SMARCA5O60264 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCA5O60264 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCA5O60264 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC23.78■■□□□ 1.4
SMARCA5O60264 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCA5O60264 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCA5O60264 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC23.78■■□□□ 1.4
SMARCA5O60264 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
SMARCA5O60264 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC23.78■■□□□ 1.4
SMARCA5O60264 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC23.78■■□□□ 1.4
SMARCA5O60264 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC23.78■■□□□ 1.4
SMARCA5O60264 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC23.78■■□□□ 1.4
SMARCA5O60264 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SMARCA5O60264 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC23.78■■□□□ 1.4
SMARCA5O60264 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCA5O60264 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCA5O60264 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCA5O60264 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCA5O60264 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
SMARCA5O60264 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCA5O60264 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCA5O60264 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCA5O60264 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
SMARCA5O60264 AC141586.3-201ENST00000562166 1838 ntBASIC23.77■■□□□ 1.4
SMARCA5O60264 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC23.77■■□□□ 1.4
SMARCA5O60264 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCA5O60264 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC23.77■■□□□ 1.4
SMARCA5O60264 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC23.77■■□□□ 1.4
SMARCA5O60264 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
SMARCA5O60264 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCA5O60264 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCA5O60264 NIFKP9-201ENST00000419265 221 ntBASIC23.77■■□□□ 1.4
SMARCA5O60264 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC23.77■■□□□ 1.4
SMARCA5O60264 REXO2-216ENST00000544196 452 ntTSL 3 BASIC23.77■■□□□ 1.4
SMARCA5O60264 AF186192.3-201ENST00000583427 947 ntBASIC23.77■■□□□ 1.4
SMARCA5O60264 ABBA01031674.1-201ENST00000635145 728 ntBASIC23.77■■□□□ 1.4
SMARCA5O60264 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCA5O60264 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC23.77■■□□□ 1.4
SMARCA5O60264 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
SMARCA5O60264 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
SMARCA5O60264 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC23.76■■□□□ 1.39
SMARCA5O60264 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC23.76■■□□□ 1.39
SMARCA5O60264 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC23.76■■□□□ 1.39
SMARCA5O60264 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMARCA5O60264 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC23.76■■□□□ 1.39
SMARCA5O60264 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SMARCA5O60264 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SMARCA5O60264 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMARCA5O60264 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMARCA5O60264 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC23.76■■□□□ 1.39
SMARCA5O60264 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC23.76■■□□□ 1.39
SMARCA5O60264 Z85996.1-201ENST00000494644 937 ntBASIC23.76■■□□□ 1.39
SMARCA5O60264 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC23.76■■□□□ 1.39
SMARCA5O60264 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC23.76■■□□□ 1.39
SMARCA5O60264 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC23.76■■□□□ 1.39
SMARCA5O60264 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
SMARCA5O60264 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SMARCA5O60264 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMARCA5O60264 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMARCA5O60264 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC23.76■■□□□ 1.39
SMARCA5O60264 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC23.75■■□□□ 1.39
SMARCA5O60264 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC23.75■■□□□ 1.39
SMARCA5O60264 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SMARCA5O60264 KRT8P41-201ENST00000533985 1514 ntBASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms