Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC189A1A4V9 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.26■□□□□ 0.67
CCDC189A1A4V9 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.26■□□□□ 0.67
CCDC189A1A4V9 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
CCDC189A1A4V9 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC189A1A4V9 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.26■□□□□ 0.67
CCDC189A1A4V9 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC189A1A4V9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.26■□□□□ 0.67
CCDC189A1A4V9 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC189A1A4V9 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC189A1A4V9 AL513477.1-201ENST00000602865 2407 ntBASIC19.26■□□□□ 0.67
CCDC189A1A4V9 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC189A1A4V9 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC189A1A4V9 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC189A1A4V9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC189A1A4V9 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC189A1A4V9 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CCDC189A1A4V9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC189A1A4V9 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC189A1A4V9 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC189A1A4V9 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC189A1A4V9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC189A1A4V9 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
CCDC189A1A4V9 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC189A1A4V9 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC189A1A4V9 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
CCDC189A1A4V9 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC189A1A4V9 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC189A1A4V9 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC189A1A4V9 AC124067.4-201ENST00000519691 2379 ntBASIC19.25■□□□□ 0.67
CCDC189A1A4V9 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC189A1A4V9 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC189A1A4V9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CCDC189A1A4V9 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCDC189A1A4V9 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC189A1A4V9 MIPEPP3-201ENST00000412105 444 ntBASIC19.25■□□□□ 0.67
CCDC189A1A4V9 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC189A1A4V9 CROCCP5-201ENST00000436658 830 ntBASIC19.25■□□□□ 0.67
CCDC189A1A4V9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.25■□□□□ 0.67
CCDC189A1A4V9 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC189A1A4V9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC189A1A4V9 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.25■□□□□ 0.67
CCDC189A1A4V9 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC189A1A4V9 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC189A1A4V9 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC189A1A4V9 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.25■□□□□ 0.67
CCDC189A1A4V9 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC189A1A4V9 AC046158.3-201ENST00000624947 2558 ntBASIC19.25■□□□□ 0.67
CCDC189A1A4V9 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC189A1A4V9 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC189A1A4V9 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
CCDC189A1A4V9 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC189A1A4V9 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC189A1A4V9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC189A1A4V9 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC189A1A4V9 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC189A1A4V9 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC189A1A4V9 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CCDC189A1A4V9 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC189A1A4V9 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC189A1A4V9 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC189A1A4V9 AC018470.1-201ENST00000624790 3129 ntBASIC19.24■□□□□ 0.67
CCDC189A1A4V9 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC189A1A4V9 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC189A1A4V9 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC189A1A4V9 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC189A1A4V9 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC189A1A4V9 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC189A1A4V9 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC189A1A4V9 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC189A1A4V9 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC189A1A4V9 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CCDC189A1A4V9 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC189A1A4V9 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC189A1A4V9 PRORSD1P-202ENST00000563365 2154 ntBASIC19.24■□□□□ 0.67
CCDC189A1A4V9 AC141586.5-201ENST00000624546 2050 ntBASIC19.24■□□□□ 0.67
CCDC189A1A4V9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC189A1A4V9 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CCDC189A1A4V9 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC189A1A4V9 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC189A1A4V9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC189A1A4V9 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC189A1A4V9 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC189A1A4V9 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
CCDC189A1A4V9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC189A1A4V9 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC189A1A4V9 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC189A1A4V9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CCDC189A1A4V9 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC189A1A4V9 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC189A1A4V9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC189A1A4V9 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC189A1A4V9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC189A1A4V9 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC189A1A4V9 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC189A1A4V9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC189A1A4V9 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC189A1A4V9 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.23■□□□□ 0.67
CCDC189A1A4V9 IKBKGP1-201ENST00000612193 1073 ntBASIC19.23■□□□□ 0.67
CCDC189A1A4V9 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms