Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRDV1A0A1B0GX56 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.97■□□□□ 0.31
TRDV1A0A1B0GX56 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRDV1A0A1B0GX56 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
TRDV1A0A1B0GX56 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRDV1A0A1B0GX56 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRDV1A0A1B0GX56 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRDV1A0A1B0GX56 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRDV1A0A1B0GX56 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRDV1A0A1B0GX56 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRDV1A0A1B0GX56 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRDV1A0A1B0GX56 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.96■□□□□ 0.31
TRDV1A0A1B0GX56 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TRDV1A0A1B0GX56 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRDV1A0A1B0GX56 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRDV1A0A1B0GX56 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRDV1A0A1B0GX56 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRDV1A0A1B0GX56 KRT18P68-201ENST00000392293 1000 ntBASIC16.96■□□□□ 0.31
TRDV1A0A1B0GX56 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.96■□□□□ 0.31
TRDV1A0A1B0GX56 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRDV1A0A1B0GX56 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRDV1A0A1B0GX56 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRDV1A0A1B0GX56 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRDV1A0A1B0GX56 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRDV1A0A1B0GX56 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRDV1A0A1B0GX56 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRDV1A0A1B0GX56 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.96■□□□□ 0.31
TRDV1A0A1B0GX56 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
TRDV1A0A1B0GX56 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.96■□□□□ 0.31
TRDV1A0A1B0GX56 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRDV1A0A1B0GX56 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRDV1A0A1B0GX56 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
TRDV1A0A1B0GX56 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.96■□□□□ 0.3
TRDV1A0A1B0GX56 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRDV1A0A1B0GX56 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.96■□□□□ 0.3
TRDV1A0A1B0GX56 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.96■□□□□ 0.3
TRDV1A0A1B0GX56 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRDV1A0A1B0GX56 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
TRDV1A0A1B0GX56 ANO7L1-203ENST00000602586 1720 ntBASIC16.96■□□□□ 0.3
TRDV1A0A1B0GX56 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRDV1A0A1B0GX56 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRDV1A0A1B0GX56 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRDV1A0A1B0GX56 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TRDV1A0A1B0GX56 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRDV1A0A1B0GX56 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRDV1A0A1B0GX56 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.95■□□□□ 0.3
TRDV1A0A1B0GX56 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRDV1A0A1B0GX56 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
TRDV1A0A1B0GX56 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TRDV1A0A1B0GX56 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
TRDV1A0A1B0GX56 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.95■□□□□ 0.3
TRDV1A0A1B0GX56 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRDV1A0A1B0GX56 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRDV1A0A1B0GX56 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRDV1A0A1B0GX56 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRDV1A0A1B0GX56 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRDV1A0A1B0GX56 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRDV1A0A1B0GX56 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRDV1A0A1B0GX56 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TRDV1A0A1B0GX56 KRT19P1-201ENST00000405746 1186 ntBASIC16.95■□□□□ 0.3
TRDV1A0A1B0GX56 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TRDV1A0A1B0GX56 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRDV1A0A1B0GX56 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRDV1A0A1B0GX56 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TRDV1A0A1B0GX56 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRDV1A0A1B0GX56 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.95■□□□□ 0.3
TRDV1A0A1B0GX56 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRDV1A0A1B0GX56 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRDV1A0A1B0GX56 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRDV1A0A1B0GX56 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRDV1A0A1B0GX56 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
TRDV1A0A1B0GX56 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRDV1A0A1B0GX56 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRDV1A0A1B0GX56 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRDV1A0A1B0GX56 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRDV1A0A1B0GX56 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRDV1A0A1B0GX56 AC138932.1-201ENST00000534164 6830 ntBASIC16.94■□□□□ 0.3
TRDV1A0A1B0GX56 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRDV1A0A1B0GX56 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRDV1A0A1B0GX56 AC090340.1-201ENST00000620778 4980 ntBASIC16.94■□□□□ 0.3
TRDV1A0A1B0GX56 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRDV1A0A1B0GX56 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRDV1A0A1B0GX56 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TRDV1A0A1B0GX56 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRDV1A0A1B0GX56 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRDV1A0A1B0GX56 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRDV1A0A1B0GX56 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.94■□□□□ 0.3
TRDV1A0A1B0GX56 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.94■□□□□ 0.3
TRDV1A0A1B0GX56 AC007322.4-201ENST00000509611 723 ntBASIC16.94■□□□□ 0.3
TRDV1A0A1B0GX56 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.94■□□□□ 0.3
TRDV1A0A1B0GX56 AC010536.3-201ENST00000620306 533 ntBASIC16.94■□□□□ 0.3
TRDV1A0A1B0GX56 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TRDV1A0A1B0GX56 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRDV1A0A1B0GX56 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRDV1A0A1B0GX56 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRDV1A0A1B0GX56 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRDV1A0A1B0GX56 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.94■□□□□ 0.3
TRDV1A0A1B0GX56 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRDV1A0A1B0GX56 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.94■□□□□ 0.3
TRDV1A0A1B0GX56 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms