Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM238LA0A1B0GVL6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM238LA0A1B0GVL6 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM238LA0A1B0GVL6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM238LA0A1B0GVL6 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.5□□□□□ -0.25
TMEM238LA0A1B0GVL6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC13.5□□□□□ -0.25
TMEM238LA0A1B0GVL6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM238LA0A1B0GVL6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM238LA0A1B0GVL6 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM238LA0A1B0GVL6 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM238LA0A1B0GVL6 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.5□□□□□ -0.25
TMEM238LA0A1B0GVL6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
TMEM238LA0A1B0GVL6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM238LA0A1B0GVL6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TMEM238LA0A1B0GVL6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC13.5□□□□□ -0.25
TMEM238LA0A1B0GVL6 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM238LA0A1B0GVL6 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM238LA0A1B0GVL6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM238LA0A1B0GVL6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM238LA0A1B0GVL6 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM238LA0A1B0GVL6 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TMEM238LA0A1B0GVL6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM238LA0A1B0GVL6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
TMEM238LA0A1B0GVL6 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC13.49□□□□□ -0.25
TMEM238LA0A1B0GVL6 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TMEM238LA0A1B0GVL6 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM238LA0A1B0GVL6 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM238LA0A1B0GVL6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM238LA0A1B0GVL6 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TMEM238LA0A1B0GVL6 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM238LA0A1B0GVL6 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
TMEM238LA0A1B0GVL6 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TMEM238LA0A1B0GVL6 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM238LA0A1B0GVL6 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM238LA0A1B0GVL6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM238LA0A1B0GVL6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM238LA0A1B0GVL6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TMEM238LA0A1B0GVL6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM238LA0A1B0GVL6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
TMEM238LA0A1B0GVL6 AC022413.1-201ENST00000624602 984 ntBASIC13.49□□□□□ -0.25
TMEM238LA0A1B0GVL6 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.49□□□□□ -0.25
TMEM238LA0A1B0GVL6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC13.49□□□□□ -0.25
TMEM238LA0A1B0GVL6 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM238LA0A1B0GVL6 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM238LA0A1B0GVL6 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM238LA0A1B0GVL6 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM238LA0A1B0GVL6 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM238LA0A1B0GVL6 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM238LA0A1B0GVL6 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TMEM238LA0A1B0GVL6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC13.49□□□□□ -0.25
TMEM238LA0A1B0GVL6 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM238LA0A1B0GVL6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
TMEM238LA0A1B0GVL6 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
TMEM238LA0A1B0GVL6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 AC120024.1-201ENST00000562672 995 ntBASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 MIR4281-201ENST00000580852 62 ntBASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 AL499627.2-201ENST00000606283 725 ntBASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC13.48□□□□□ -0.25
TMEM238LA0A1B0GVL6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms