Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TRAV12-3A0A0B4J271 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV12-3A0A0B4J271 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV12-3A0A0B4J271 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV12-3A0A0B4J271 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV12-3A0A0B4J271 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV12-3A0A0B4J271 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC14.34□□□□□ -0.11
TRAV12-3A0A0B4J271 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
TRAV12-3A0A0B4J271 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV12-3A0A0B4J271 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV12-3A0A0B4J271 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.34□□□□□ -0.11
TRAV12-3A0A0B4J271 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
TRAV12-3A0A0B4J271 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV12-3A0A0B4J271 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV12-3A0A0B4J271 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TRAV12-3A0A0B4J271 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV12-3A0A0B4J271 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV12-3A0A0B4J271 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC14.33□□□□□ -0.11
TRAV12-3A0A0B4J271 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC14.33□□□□□ -0.11
TRAV12-3A0A0B4J271 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV12-3A0A0B4J271 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.33□□□□□ -0.11
TRAV12-3A0A0B4J271 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
TRAV12-3A0A0B4J271 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
TRAV12-3A0A0B4J271 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 PNMA6B-201ENST00000538162 1200 ntBASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 AC098934.4-201ENST00000564127 592 ntBASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 AC060766.5-201ENST00000590539 871 ntBASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 AL121906.2-201ENST00000621597 723 ntBASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 MYC-209ENST00000641252 345 ntBASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 AC004408.2-201ENST00000623613 2777 ntBASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRAV12-3A0A0B4J271 TNXA-203ENST00000507684 2038 ntBASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 AL020996.1-203ENST00000536896 2307 ntBASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 AP006587.1-201ENST00000534129 1502 ntBASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 ABHD17AP6-201ENST00000458502 1044 ntBASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 OR2A1-AS1-207ENST00000486094 819 ntBASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
TRAV12-3A0A0B4J271 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV12-3A0A0B4J271 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms