Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 RPS2P52-201ENST00000469610 820 ntBASIC15.14■□□□□ 0.01
TRAV30A0A087WSZ9 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV30A0A087WSZ9 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.14■□□□□ 0.01
TRAV30A0A087WSZ9 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV30A0A087WSZ9 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC15.14■□□□□ 0.01
TRAV30A0A087WSZ9 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC15.14■□□□□ 0.01
TRAV30A0A087WSZ9 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC15.14■□□□□ 0.01
TRAV30A0A087WSZ9 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRAV30A0A087WSZ9 HLA-B-256ENST00000639848 1089 ntBASIC15.14■□□□□ 0.01
TRAV30A0A087WSZ9 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV30A0A087WSZ9 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
TRAV30A0A087WSZ9 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV30A0A087WSZ9 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV30A0A087WSZ9 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV30A0A087WSZ9 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV30A0A087WSZ9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV30A0A087WSZ9 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV30A0A087WSZ9 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV30A0A087WSZ9 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 AP006587.1-201ENST00000534129 1502 ntBASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 ZNF815P-204ENST00000434898 1737 ntBASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 YBX1P10-201ENST00000444752 975 ntBASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 RHEB-204ENST00000472642 900 ntTSL 3 BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 TNXA-203ENST00000507684 2038 ntBASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 AC092368.3-202ENST00000574180 1591 ntBASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 AC006557.6-201ENST00000623071 864 ntBASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 PFKL-212ENST00000628044 129 ntTSL 3 BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV30A0A087WSZ9 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 PPP1R14BP2-201ENST00000426284 444 ntBASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 NCF1B-203ENST00000435988 1254 ntBASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 TSPY6P-201ENST00000448518 926 ntBASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 PPP1R14BP3-201ENST00000509033 445 ntBASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 BET1L-207ENST00000529614 560 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 AC060766.5-201ENST00000590539 871 ntBASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV30A0A087WSZ9 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms