Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ATXN3LQ9H3M9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ATXN3LQ9H3M9 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.28■□□□□ 0.84
ATXN3LQ9H3M9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ATXN3LQ9H3M9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATXN3LQ9H3M9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.28■□□□□ 0.84
ATXN3LQ9H3M9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATXN3LQ9H3M9 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.28■□□□□ 0.84
ATXN3LQ9H3M9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.28■□□□□ 0.84
ATXN3LQ9H3M9 AC104076.2-201ENST00000448912 469 ntBASIC20.28■□□□□ 0.84
ATXN3LQ9H3M9 Z85996.1-201ENST00000494644 937 ntBASIC20.28■□□□□ 0.84
ATXN3LQ9H3M9 AL160286.2-201ENST00000567150 934 ntBASIC20.28■□□□□ 0.84
ATXN3LQ9H3M9 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATXN3LQ9H3M9 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATXN3LQ9H3M9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.28■□□□□ 0.84
ATXN3LQ9H3M9 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.28■□□□□ 0.84
ATXN3LQ9H3M9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATXN3LQ9H3M9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATXN3LQ9H3M9 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATXN3LQ9H3M9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATXN3LQ9H3M9 AL691432.2-201ENST00000607222 2038 ntBASIC20.27■□□□□ 0.84
ATXN3LQ9H3M9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ATXN3LQ9H3M9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATXN3LQ9H3M9 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
ATXN3LQ9H3M9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATXN3LQ9H3M9 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATXN3LQ9H3M9 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.27■□□□□ 0.84
ATXN3LQ9H3M9 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.27■□□□□ 0.84
ATXN3LQ9H3M9 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATXN3LQ9H3M9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.27■□□□□ 0.84
ATXN3LQ9H3M9 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.27■□□□□ 0.84
ATXN3LQ9H3M9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.27■□□□□ 0.84
ATXN3LQ9H3M9 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.27■□□□□ 0.84
ATXN3LQ9H3M9 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.27■□□□□ 0.84
ATXN3LQ9H3M9 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.27■□□□□ 0.84
ATXN3LQ9H3M9 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.27■□□□□ 0.84
ATXN3LQ9H3M9 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.27■□□□□ 0.84
ATXN3LQ9H3M9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATXN3LQ9H3M9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.27■□□□□ 0.84
ATXN3LQ9H3M9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATXN3LQ9H3M9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
ATXN3LQ9H3M9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.27■□□□□ 0.83
ATXN3LQ9H3M9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ATXN3LQ9H3M9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
ATXN3LQ9H3M9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATXN3LQ9H3M9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATXN3LQ9H3M9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ATXN3LQ9H3M9 LINC01465-201ENST00000408887 1940 ntBASIC20.26■□□□□ 0.83
ATXN3LQ9H3M9 TCF3P1-201ENST00000423021 1937 ntBASIC20.26■□□□□ 0.83
ATXN3LQ9H3M9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ATXN3LQ9H3M9 AC096733.2-201ENST00000609937 1394 ntBASIC20.26■□□□□ 0.83
ATXN3LQ9H3M9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ATXN3LQ9H3M9 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATXN3LQ9H3M9 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATXN3LQ9H3M9 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.26■□□□□ 0.83
ATXN3LQ9H3M9 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.26■□□□□ 0.83
ATXN3LQ9H3M9 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ATXN3LQ9H3M9 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATXN3LQ9H3M9 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
ATXN3LQ9H3M9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATXN3LQ9H3M9 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATXN3LQ9H3M9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATXN3LQ9H3M9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATXN3LQ9H3M9 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
ATXN3LQ9H3M9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATXN3LQ9H3M9 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.26■□□□□ 0.83
ATXN3LQ9H3M9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATXN3LQ9H3M9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN3LQ9H3M9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ATXN3LQ9H3M9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.25■□□□□ 0.83
ATXN3LQ9H3M9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.25■□□□□ 0.83
ATXN3LQ9H3M9 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN3LQ9H3M9 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.25■□□□□ 0.83
ATXN3LQ9H3M9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN3LQ9H3M9 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ATXN3LQ9H3M9 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ATXN3LQ9H3M9 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN3LQ9H3M9 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.25■□□□□ 0.83
ATXN3LQ9H3M9 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN3LQ9H3M9 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN3LQ9H3M9 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN3LQ9H3M9 DUX4L26-201ENST00000489078 1255 ntBASIC20.25■□□□□ 0.83
ATXN3LQ9H3M9 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.25■□□□□ 0.83
ATXN3LQ9H3M9 FAM87A-204ENST00000613235 858 ntBASIC20.25■□□□□ 0.83
ATXN3LQ9H3M9 AC116562.4-202ENST00000641738 218 ntBASIC20.25■□□□□ 0.83
ATXN3LQ9H3M9 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ATXN3LQ9H3M9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.25■□□□□ 0.83
ATXN3LQ9H3M9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ATXN3LQ9H3M9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.25■□□□□ 0.83
ATXN3LQ9H3M9 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN3LQ9H3M9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN3LQ9H3M9 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ATXN3LQ9H3M9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN3LQ9H3M9 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN3LQ9H3M9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
ATXN3LQ9H3M9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN3LQ9H3M9 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN3LQ9H3M9 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN3LQ9H3M9 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ATXN3LQ9H3M9 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms