Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 ARID1B-201ENST00000319584 2199 ntTSL 212.71□□□□□ -0.371e-6■■■■□ 20.1
XRN2Q9H0D6 ARID1B-205ENST00000414678 6528 ntAPPRIS ALT2 TSL 58.62□□□□□ -1.031e-6■■■■□ 20.1
XRN2Q9H0D6 ARID1B-206ENST00000452544 4443 ntTSL 27.72□□□□□ -1.171e-6■■■■□ 20.1
XRN2Q9H0D6 PVT1-218ENST00000523328 343 ntTSL 1 (best)28.1■■■□□ 2.092e-6■■■■□ 20.1
XRN2Q9H0D6 PVT1-220ENST00000524165 458 ntTSL 222.3■■□□□ 1.162e-6■■■■□ 20.1
XRN2Q9H0D6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.251e-6■■■■□ 20.1
XRN2Q9H0D6 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.061e-6■■■■□ 20.1
XRN2Q9H0D6 BHLHE40-203ENST00000467610 1366 ntTSL 220.35■□□□□ 0.852e-6■■■■□ 20.1
XRN2Q9H0D6 BHLHE40-201ENST00000256495 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.352e-6■■■■□ 20.1
XRN2Q9H0D6 CPSF7-212ENST00000489728 488 ntTSL 412.82□□□□□ -0.364e-10■■■■□ 20.1
XRN2Q9H0D6 PRR5-210ENST00000459857 560 ntTSL 423.67■■□□□ 1.386e-6■■■■□ 20.1
XRN2Q9H0D6 PRR5-213ENST00000492289 735 ntTSL 322.48■■□□□ 1.196e-6■■■■□ 20.1
XRN2Q9H0D6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC21.02■□□□□ 0.965e-7■■■■□ 20
XRN2Q9H0D6 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.28■□□□□ 0.845e-7■■■■□ 20
XRN2Q9H0D6 AC011530.1-203ENST00000597712 432 ntTSL 218.1■□□□□ 0.495e-7■■■■□ 20
XRN2Q9H0D6 AC011530.1-202ENST00000596586 397 ntAPPRIS P5 TSL 216.43■□□□□ 0.225e-7■■■■□ 20
XRN2Q9H0D6 AC011530.1-204ENST00000595946 321 ntAPPRIS ALT2 TSL 216.43■□□□□ 0.225e-7■■■■□ 20
XRN2Q9H0D6 DMPK-206ENST00000588522 2920 ntTSL 515.48■□□□□ 0.075e-7■■■■□ 20
XRN2Q9H0D6 FLOT1-205ENST00000438162 888 ntTSL 516.02■□□□□ 0.162e-7■■■■□ 20
XRN2Q9H0D6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.85■■□□□ 1.091e-6■■■■□ 20
XRN2Q9H0D6 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.661e-6■■■■□ 20
XRN2Q9H0D6 FBXO31-204ENST00000565593 2717 ntTSL 519.05■□□□□ 0.641e-6■■■■□ 20
XRN2Q9H0D6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.87■■□□□ 1.091e-19■■■■□ 20
XRN2Q9H0D6 RPS13-205ENST00000527571 777 ntTSL 220.87■□□□□ 0.931e-9■■■■□ 20
XRN2Q9H0D6 RPS13-203ENST00000525828 664 ntTSL 220.77■□□□□ 0.921e-9■■■■□ 20
XRN2Q9H0D6 RPS13-206ENST00000528074 583 ntTSL 219.03■□□□□ 0.641e-9■■■■□ 20
XRN2Q9H0D6 RPS13-204ENST00000526895 561 ntTSL 317.3■□□□□ 0.361e-9■■■■□ 20
XRN2Q9H0D6 RPS13-209ENST00000533969 355 ntTSL 316.37■□□□□ 0.211e-9■■■■□ 20
XRN2Q9H0D6 RPS13-210ENST00000534329 568 ntTSL 216.24■□□□□ 0.191e-9■■■■□ 20
XRN2Q9H0D6 RPS13-201ENST00000228140 491 ntTSL 2 BASIC12.58□□□□□ -0.41e-9■■■■□ 20
XRN2Q9H0D6 RPS13-202ENST00000525634 646 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.591e-9■■■■□ 20
XRN2Q9H0D6 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC29.67■■■□□ 2.344e-7■■■■□ 20
XRN2Q9H0D6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC29.67■■■□□ 2.344e-7■■■■□ 20
XRN2Q9H0D6 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.54■■■□□ 2.164e-7■■■■□ 20
XRN2Q9H0D6 MAZ-211ENST00000567444 635 ntTSL 227.8■■■□□ 2.044e-7■■■■□ 20
XRN2Q9H0D6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC24.87■■□□□ 1.574e-7■■■■□ 20
XRN2Q9H0D6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.6■■□□□ 1.534e-7■■■■□ 20
XRN2Q9H0D6 MAZ-207ENST00000563012 646 ntTSL 323.9■■□□□ 1.424e-7■■■■□ 20
XRN2Q9H0D6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.374e-7■■■■□ 20
XRN2Q9H0D6 KRTAP5-AS1-202ENST00000524947 570 ntTSL 423.18■■□□□ 1.35e-6■■■■□ 20
XRN2Q9H0D6 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.084e-7■■■■□ 20
XRN2Q9H0D6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.94■□□□□ 0.785e-6■■■■□ 20
XRN2Q9H0D6 MAZ-213ENST00000568411 599 ntTSL 319.37■□□□□ 0.694e-7■■■■□ 20
XRN2Q9H0D6 MAZ-204ENST00000561855 672 ntTSL 514.96□□□□□ -0.014e-7■■■■□ 20
XRN2Q9H0D6 HMGB1-206ENST00000405805 4199 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.572e-6■■■■□ 20
XRN2Q9H0D6 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.912e-6■■■■□ 20
XRN2Q9H0D6 HMGB1-207ENST00000468384 503 ntTSL 1 (best)7.19□□□□□ -1.262e-6■■■■□ 20
XRN2Q9H0D6 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.66□□□□□ -1.822e-6■■■■□ 20
XRN2Q9H0D6 LUC7L2-203ENST00000435096 570 ntTSL 321.91■■□□□ 1.12e-8■■■■□ 20
XRN2Q9H0D6 LUC7L2-204ENST00000456182 2411 ntTSL 1 (best)19.16■□□□□ 0.662e-8■■■■□ 20
XRN2Q9H0D6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.25■□□□□ 0.512e-8■■■■□ 20
XRN2Q9H0D6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.462e-8■■■■□ 20
XRN2Q9H0D6 LUC7L2-209ENST00000608368 551 ntTSL 417.52■□□□□ 0.42e-8■■■■□ 20
XRN2Q9H0D6 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC15.98■□□□□ 0.152e-8■■■■□ 20
XRN2Q9H0D6 C7orf55-LUC7L2-201ENST00000541515 1661 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.852e-8■■■■□ 20
XRN2Q9H0D6 MIR193BHG-208ENST00000641175 619 nt20.06■□□□□ 0.81e-8■■■■□ 20
XRN2Q9H0D6 MIR193BHG-201ENST00000570945 3219 ntTSL 315.89■□□□□ 0.131e-8■■■■□ 20
XRN2Q9H0D6 MIR193BHG-211ENST00000641433 5365 ntBASIC13.75□□□□□ -0.211e-8■■■■□ 20
XRN2Q9H0D6 MIR193BHG-204ENST00000634265 892 ntTSL 59.6□□□□□ -0.871e-8■■■■□ 20
XRN2Q9H0D6 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.47■□□□□ 0.072e-6■■■■□ 20
XRN2Q9H0D6 MARS-204ENST00000545888 2979 ntTSL 514.28□□□□□ -0.122e-6■■■■□ 20
XRN2Q9H0D6 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.232e-6■■■■□ 20
XRN2Q9H0D6 MARS-203ENST00000537638 3592 ntTSL 212.95□□□□□ -0.342e-6■■■■□ 20
XRN2Q9H0D6 USP36-205ENST00000586531 898 ntTSL 333.11■■■□□ 2.891e-6■■■■□ 20
XRN2Q9H0D6 USP36-224ENST00000592907 543 ntTSL 228.59■■■□□ 2.171e-6■■■■□ 20
XRN2Q9H0D6 USP36-209ENST00000587783 679 ntTSL 326.26■■□□□ 1.791e-6■■■■□ 20
XRN2Q9H0D6 USP36-220ENST00000591942 564 ntTSL 526.11■■□□□ 1.771e-6■■■■□ 20
XRN2Q9H0D6 USP36-212ENST00000588365 546 ntTSL 424.65■■□□□ 1.541e-6■■■■□ 20
XRN2Q9H0D6 USP36-216ENST00000589424 970 ntTSL 5 BASIC24.09■■□□□ 1.451e-6■■■■□ 20
XRN2Q9H0D6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.45■■□□□ 1.341e-6■■■■□ 20
XRN2Q9H0D6 USP36-222ENST00000592275 594 ntTSL 417.4■□□□□ 0.381e-6■■■■□ 20
XRN2Q9H0D6 YWHAZ-216ENST00000521309 1399 ntTSL 2 BASIC13.17□□□□□ -0.34e-7■■■■□ 20
XRN2Q9H0D6 YWHAZ-207ENST00000395958 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.544e-7■■■■□ 20
XRN2Q9H0D6 YWHAZ-212ENST00000480304 2247 ntTSL 210.19□□□□□ -0.784e-7■■■■□ 20
XRN2Q9H0D6 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.53■□□□□ 0.45e-6■■■■□ 20
XRN2Q9H0D6 C16orf52-201ENST00000331057 1359 ntTSL 1 (best)32.52■■■□□ 2.81e-7■■■■□ 20
XRN2Q9H0D6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC28.7■■■□□ 2.181e-7■■■■□ 20
XRN2Q9H0D6 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.011e-7■■■■□ 20
XRN2Q9H0D6 GSE1-216ENST00000637419 2683 ntTSL 519.33■□□□□ 0.692e-6■■■■□ 20
XRN2Q9H0D6 FBXO31-203ENST00000563956 548 ntTSL 327.16■■□□□ 1.941e-12■■■■□ 20
XRN2Q9H0D6 FBXO31-206ENST00000569412 431 ntTSL 56.34□□□□□ -1.391e-12■■■■□ 20
XRN2Q9H0D6 ARFGAP1-207ENST00000518618 1244 ntTSL 221.26■□□□□ 0.994e-6■■■■□ 20
XRN2Q9H0D6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.95■□□□□ 0.463e-6■■■■□ 20
XRN2Q9H0D6 ARFGAP1-204ENST00000395285 2697 ntTSL 216.29■□□□□ 0.24e-6■■■■□ 20
XRN2Q9H0D6 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.093e-6■■■■□ 20
XRN2Q9H0D6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.083e-6■■■■□ 20
XRN2Q9H0D6 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.82□□□□□ -0.043e-6■■■■□ 20
XRN2Q9H0D6 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.53□□□□□ -0.083e-6■■■■□ 20
XRN2Q9H0D6 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.363e-6■■■■□ 20
XRN2Q9H0D6 ATP2A3-203ENST00000359983 3290 ntTSL 5 BASIC12.42□□□□□ -0.423e-6■■■■□ 20
XRN2Q9H0D6 OAZ1-208ENST00000592727 726 ntTSL 218.01■□□□□ 0.473e-16■■■■□ 19.9
XRN2Q9H0D6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC24.34■■□□□ 1.496e-7■■■■□ 19.9
XRN2Q9H0D6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.136e-7■■■■□ 19.9
XRN2Q9H0D6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.01■□□□□ 0.476e-7■■■■□ 19.9
XRN2Q9H0D6 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.44■□□□□ 0.226e-7■■■■□ 19.9
XRN2Q9H0D6 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.044e-7■■■■□ 19.9
XRN2Q9H0D6 DNAJC5-202ENST00000470551 5287 ntTSL 214.22□□□□□ -0.134e-7■■■■□ 19.9
XRN2Q9H0D6 MARK4-203ENST00000587566 553 ntTSL 517.64■□□□□ 0.419e-7■■■■□ 19.9
XRN2Q9H0D6 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.052e-7■■■■□ 19.9
XRN2Q9H0D6 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.73□□□□□ -0.052e-7■■■■□ 19.9
Retrieved 100 of 21,068 protein–RNA pairs in 93.5 ms