Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APH1AQ96BI3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APH1AQ96BI3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
APH1AQ96BI3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.12■□□□□ 0.33
APH1AQ96BI3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
APH1AQ96BI3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.12■□□□□ 0.33
APH1AQ96BI3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APH1AQ96BI3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.12■□□□□ 0.33
APH1AQ96BI3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.12■□□□□ 0.33
APH1AQ96BI3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
APH1AQ96BI3 AC004980.1-204ENST00000429707 299 ntBASIC17.12■□□□□ 0.33
APH1AQ96BI3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.12■□□□□ 0.33
APH1AQ96BI3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.12■□□□□ 0.33
APH1AQ96BI3 AP003071.4-201ENST00000562276 1284 ntBASIC17.12■□□□□ 0.33
APH1AQ96BI3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.12■□□□□ 0.33
APH1AQ96BI3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.12■□□□□ 0.33
APH1AQ96BI3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
APH1AQ96BI3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
APH1AQ96BI3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
APH1AQ96BI3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
APH1AQ96BI3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.12■□□□□ 0.33
APH1AQ96BI3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
APH1AQ96BI3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APH1AQ96BI3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.12■□□□□ 0.33
APH1AQ96BI3 TREX1-205ENST00000625293 1783 ntBASIC17.12■□□□□ 0.33
APH1AQ96BI3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
APH1AQ96BI3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APH1AQ96BI3 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.12■□□□□ 0.33
APH1AQ96BI3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.11■□□□□ 0.33
APH1AQ96BI3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APH1AQ96BI3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APH1AQ96BI3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.11■□□□□ 0.33
APH1AQ96BI3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.11■□□□□ 0.33
APH1AQ96BI3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
APH1AQ96BI3 ZNF815P-204ENST00000434898 1737 ntBASIC17.11■□□□□ 0.33
APH1AQ96BI3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APH1AQ96BI3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APH1AQ96BI3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
APH1AQ96BI3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.11■□□□□ 0.33
APH1AQ96BI3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.11■□□□□ 0.33
APH1AQ96BI3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.11■□□□□ 0.33
APH1AQ96BI3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
APH1AQ96BI3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.11■□□□□ 0.33
APH1AQ96BI3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.11■□□□□ 0.33
APH1AQ96BI3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
APH1AQ96BI3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.11■□□□□ 0.33
APH1AQ96BI3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APH1AQ96BI3 AFG3L1P-217ENST00000557444 2447 ntBASIC17.1■□□□□ 0.33
APH1AQ96BI3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APH1AQ96BI3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APH1AQ96BI3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
APH1AQ96BI3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.1■□□□□ 0.33
APH1AQ96BI3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.1■□□□□ 0.33
APH1AQ96BI3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APH1AQ96BI3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.1■□□□□ 0.33
APH1AQ96BI3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
APH1AQ96BI3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.1■□□□□ 0.33
APH1AQ96BI3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.1■□□□□ 0.33
APH1AQ96BI3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.1■□□□□ 0.33
APH1AQ96BI3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
APH1AQ96BI3 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.1■□□□□ 0.33
APH1AQ96BI3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
APH1AQ96BI3 FSCN1P1-201ENST00000568912 1481 ntBASIC17.1■□□□□ 0.33
APH1AQ96BI3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.1■□□□□ 0.33
APH1AQ96BI3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
APH1AQ96BI3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
APH1AQ96BI3 LINC01465-201ENST00000408887 1940 ntBASIC17.09■□□□□ 0.33
APH1AQ96BI3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APH1AQ96BI3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APH1AQ96BI3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
APH1AQ96BI3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
APH1AQ96BI3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APH1AQ96BI3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APH1AQ96BI3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.09■□□□□ 0.33
APH1AQ96BI3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.09■□□□□ 0.33
APH1AQ96BI3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APH1AQ96BI3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.09■□□□□ 0.33
APH1AQ96BI3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.09■□□□□ 0.33
APH1AQ96BI3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
APH1AQ96BI3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APH1AQ96BI3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APH1AQ96BI3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APH1AQ96BI3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APH1AQ96BI3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.09■□□□□ 0.33
APH1AQ96BI3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
APH1AQ96BI3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
APH1AQ96BI3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.09■□□□□ 0.33
APH1AQ96BI3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APH1AQ96BI3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APH1AQ96BI3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
APH1AQ96BI3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
APH1AQ96BI3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
APH1AQ96BI3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
APH1AQ96BI3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
APH1AQ96BI3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
APH1AQ96BI3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
APH1AQ96BI3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
APH1AQ96BI3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
APH1AQ96BI3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
APH1AQ96BI3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms