Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 KSR1P1-201ENST00000446298 240 ntBASIC17.02■□□□□ 0.32
TMEM54Q969K7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM54Q969K7 RPS2P4-201ENST00000476944 856 ntBASIC17.02■□□□□ 0.32
TMEM54Q969K7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.02■□□□□ 0.32
TMEM54Q969K7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.02■□□□□ 0.32
TMEM54Q969K7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM54Q969K7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM54Q969K7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMEM54Q969K7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TMEM54Q969K7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
TMEM54Q969K7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
TMEM54Q969K7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.31
TMEM54Q969K7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.01■□□□□ 0.31
TMEM54Q969K7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
TMEM54Q969K7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.01■□□□□ 0.31
TMEM54Q969K7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM54Q969K7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM54Q969K7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM54Q969K7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM54Q969K7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM54Q969K7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM54Q969K7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM54Q969K7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM54Q969K7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM54Q969K7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.01■□□□□ 0.31
TMEM54Q969K7 AC004980.1-204ENST00000429707 299 ntBASIC17.01■□□□□ 0.31
TMEM54Q969K7 AL158047.1-201ENST00000445918 881 ntBASIC17.01■□□□□ 0.31
TMEM54Q969K7 UBE2SP1-201ENST00000450587 669 ntBASIC17.01■□□□□ 0.31
TMEM54Q969K7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM54Q969K7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM54Q969K7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.01■□□□□ 0.31
TMEM54Q969K7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM54Q969K7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.01■□□□□ 0.31
TMEM54Q969K7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.01■□□□□ 0.31
TMEM54Q969K7 AF186192.3-201ENST00000583427 947 ntBASIC17.01■□□□□ 0.31
TMEM54Q969K7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.01■□□□□ 0.31
TMEM54Q969K7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TMEM54Q969K7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.01■□□□□ 0.31
TMEM54Q969K7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.01■□□□□ 0.31
TMEM54Q969K7 AC131212.4-201ENST00000623606 975 ntBASIC17.01■□□□□ 0.31
TMEM54Q969K7 BX323043.1-201ENST00000641006 1765 ntBASIC17.01■□□□□ 0.31
TMEM54Q969K7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM54Q969K7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.01■□□□□ 0.31
TMEM54Q969K7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM54Q969K7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM54Q969K7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM54Q969K7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17■□□□□ 0.31
TMEM54Q969K7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM54Q969K7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM54Q969K7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17■□□□□ 0.31
TMEM54Q969K7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM54Q969K7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17■□□□□ 0.31
TMEM54Q969K7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM54Q969K7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TMEM54Q969K7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17■□□□□ 0.31
TMEM54Q969K7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM54Q969K7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM54Q969K7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17■□□□□ 0.31
TMEM54Q969K7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17■□□□□ 0.31
TMEM54Q969K7 Z85996.1-201ENST00000494644 937 ntBASIC17■□□□□ 0.31
TMEM54Q969K7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17■□□□□ 0.31
TMEM54Q969K7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17■□□□□ 0.31
TMEM54Q969K7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
TMEM54Q969K7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17■□□□□ 0.31
TMEM54Q969K7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17■□□□□ 0.31
TMEM54Q969K7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17■□□□□ 0.31
TMEM54Q969K7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17■□□□□ 0.31
TMEM54Q969K7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17■□□□□ 0.31
TMEM54Q969K7 KRT8P41-201ENST00000533985 1514 ntBASIC17■□□□□ 0.31
TMEM54Q969K7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM54Q969K7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM54Q969K7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.99■□□□□ 0.31
TMEM54Q969K7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM54Q969K7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM54Q969K7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM54Q969K7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM54Q969K7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM54Q969K7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TMEM54Q969K7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.99■□□□□ 0.31
TMEM54Q969K7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM54Q969K7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM54Q969K7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
TMEM54Q969K7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM54Q969K7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM54Q969K7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM54Q969K7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TMEM54Q969K7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TMEM54Q969K7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TMEM54Q969K7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
TMEM54Q969K7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TMEM54Q969K7 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.99■□□□□ 0.31
TMEM54Q969K7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM54Q969K7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TMEM54Q969K7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.99■□□□□ 0.31
TMEM54Q969K7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.99■□□□□ 0.31
TMEM54Q969K7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.99■□□□□ 0.31
TMEM54Q969K7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM54Q969K7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM54Q969K7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.99■□□□□ 0.31
TMEM54Q969K7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms