Protein–RNA interactions for Protein: Q8N1L1

LINC00528, Putative uncharacterized protein encoded by LINC00528, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00528Q8N1L1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00528Q8N1L1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00528Q8N1L1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
LINC00528Q8N1L1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00528Q8N1L1 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00528Q8N1L1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
LINC00528Q8N1L1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00528Q8N1L1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC00528Q8N1L1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00528Q8N1L1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
LINC00528Q8N1L1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 AC010331.1-201ENST00000611423 582 ntBASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 AC120498.8-201ENST00000614275 531 ntBASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00528Q8N1L1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 RER1-204ENST00000378518 522 ntTSL 3 BASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 AC133681.1-201ENST00000465482 601 ntBASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 AC005829.2-201ENST00000571422 1056 ntBASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 AC024933.1-201ENST00000608472 348 ntBASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 AC110285.5-201ENST00000611501 352 ntBASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00528Q8N1L1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00528Q8N1L1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00528Q8N1L1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00528Q8N1L1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00528Q8N1L1 AP000974.1-201ENST00000623909 2387 ntBASIC12.71□□□□□ -0.37
LINC00528Q8N1L1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00528Q8N1L1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00528Q8N1L1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00528Q8N1L1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.37
LINC00528Q8N1L1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00528Q8N1L1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00528Q8N1L1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
LINC00528Q8N1L1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00528Q8N1L1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC12.71□□□□□ -0.37
LINC00528Q8N1L1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LINC00528Q8N1L1 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms